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Table 3 Results for simulated data.

From: Efficient and scalable scaffolding using optical restriction maps

Length Contigs Method Placed Observed length Difference Edit dist Coverage Time (s)
1 × 105 bp 7 GPA1 6 84689 15311 15483 84.69% 0.40
   GPA2 6 84689 15311 15483 84.69% 0.45
   GPA3 6 84689 15311 15483 84.69% 0.37
3 × 105 bp 34 GPA1 26 259619 40381 40923 86.54% 1.95
   GPA2 26 281905 18095 18917 93.97% 2.07
   GPA3 32 260662 39338 86220 86.89% 2.10
5 × 105 bp 52 GPA1 39 445727 54273 55210 89.15% 4.67
   GPA2 39 454376 45624 50185 90.88% 5.46
   GPA3 38 431582 68418 69285 86.32% 4.67
7 × 105 bp 53 GPA1 43 571908 128092 129160 81.70% 8.62
   GPA2 45 656139 45624 48593 93.73% 8.27
   GPA3 50 586588 113412 143189 83.80% 8.17