Table 6 Read mapping statistics and correlation between gene expression levels estimated by IsoEM and qPCR measurement for Ion Torrent HBRR dataset.
From: Transcriptome assembly and quantification from Ion Torrent RNA-Seq data
Run | # reads | # mapped reads | R 2 |
|---|---|---|---|
LUC-140 265 | 1,588,375 | 1,142,306 | 0.728 |
POZ-124 266 | 1,495,151 | 1,066,809 | 0.729 |
DID-143 282 | 1,703,169 | 1,215,093 | 0.732 |
GOG-139 281 | 1,621,848 | 1,208,950 | 0.736 |
LUC-141 267 | 1,390,667 | 1,039,816 | 0.747 |
All runs | 7,799,210 | 5,672,974 | 0.756 |