Table 2 Maximum likelihood estimates of the supergenome size using reconstructed gene gains (column 5) and gains plus expansions (column 4) using uniform gain probabilities (model F1).
From: Estimation of prokaryotic supergenome size and composition from gene frequency distributions
Group | Gains P:K | gains+exp P:K | gains S | gains+exp S |
|---|---|---|---|---|
1 | 1312:1445 | 1789:2028 | 7355 ± 1195 | 7910 ± 939 |
2 | 4193:4468 | 4805:5600 | 34783 ± 4019 | 17805 ± 1137 |
3 | 6227:5647 | 6956:8003 | 64763 ± 7001 | 27853 ± 1564 |
4 | 4577:4777 | 5346:5923 | 55434 ± 7618 | 28387 ± 2205 |
5 | 3762:3844 | 4744:5239 | 88790 ± 19330 | 25944 ± 2180 |
6 | 3805:3816 | 4651:5071 | 660500 ± 397000 | 28893 ± 2659 |
7 | 5551:5947 | 6462:7351 | 42643 ± 4091 | 27885 ± 1713 |
8 | 4920:5198 | 5873:6792 | 46838 ± 5414 | 22776 ± 1360 |
9 | 4730:5020 | 5745:6483 | 41751 ±4711 | 26266 ±1781 |