Table 3 Domain profile definitions used in funRNA
From: funRNA: a fungi-centered genomics platform for genes encoding key components of RNAi
| Gene family | InterPro accession number | Domain description | Number of genes* | Number of genomes* |
|---|---|---|---|---|
| Argonaute | IPR003100 | Argonaute/Dicer protein, PAZ |
1,163 (396) |
209 (122) |
| IPR003165 | Stem cell self-renewal protein Piwi | |||
| Dicer | IPR000999 | Ribonuclease III |
442 (232) |
180 (111) |
| IPR001159** | Double-stranded RNA-binding | |||
| IPR005034** | Dicer double-stranded RNA-binding fold | |||
| RdRP | IPR007855 | RNA-dependent RNA polymerase, eukaryotic type |
678 (441) |
157 (111) |