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Table 3 Domain profile definitions used in funRNA

From: funRNA: a fungi-centered genomics platform for genes encoding key components of RNAi

Gene family InterPro accession number Domain description Number of genes* Number of genomes*
Argonaute IPR003100 Argonaute/Dicer protein, PAZ 1,163
(396)
209
(122)
  IPR003165 Stem cell self-renewal protein Piwi   
Dicer IPR000999 Ribonuclease III 442
(232)
180
(111)
  IPR001159** Double-stranded RNA-binding   
  IPR005034** Dicer double-stranded RNA-binding fold   
RdRP IPR007855 RNA-dependent RNA polymerase, eukaryotic type 678
(441)
157
(111)
  1. * Numbers of fungal genes/genomes are shown in parentheses.
  2. ** Genes containing one of two double-stranded RNA-binding domains were predicted to be Dicer-encoding genes.