Table 2 Human genes that include putative non-overlapping G4 sequences used in our experiments.
From: Using hidden Markov models to investigate G-quadruplex motifs in genomic sequences
Gene symbol | # putative G4s | Length (nt) | Gene symbol | # putative G4s | Length (nt) |
|---|---|---|---|---|---|
AHNAK | 762 | 113317 | MAWBP | 204 | 50268 |
ARS2 | 105 | 13551 | MGC3207 | 72 | 9751 |
BPGM | 102 | 33014 | MGC4707 | 815 | 227682 |
C14orf138 | 22 | 7942 | NGFRAP1 | 19 | 1734 |
CCM2 | 373 | 76283 | NT5C3 | 120 | 48668 |
CNOT4 | 309 | 148303 | PHF14 | 336 | 195730 |
COMMD6 | 18 | 11871 | PLEKHH1 | 295 | 56220 |
DIP2A | 471 | 109711 | PPP1R9A | 742 | 386048 |
DKFZp761I2123 | 161 | 20951 | RAB37 | 457 | 76205 |
DNAJA5 | 76 | 29372 | RAP1B | 130 | 49723 |
EGFR | 695 | 188307 | RGS6 | 2135 | 630822 |
ERCC1 | 118 | 14306 | SEMA5B | 786 | 119412 |
FLJ20097 | 232 | 126686 | SF1 | 78 | 14164 |
FMO3 | 57 | 26924 | SLC37A3 | 303 | 64760 |
FOXM1 | 86 | 19455 | SP8 | 29 | 4605 |
FPRL1 | 41 | 9327 | SUNC1 | 109 | 41972 |
FUS | 82 | 11648 | SYNJ1 | 256 | 99205 |
GMFB | 24 | 14536 | TFEC | 145 | 95597 |
HTF9C | 69 | 5371 | TJP2 | 283 | 81032 |
IFRD1 | 171 | 53022 | TRAF7 | 273 | 22332 |
IMPDH1 | 176 | 17976 | UPP1 | 108 | 19976 |
ITM2C | 135 | 14343 | USP42 | 26 | 56635 |
KIAA2010 | 174 | 52859 | ZAP70 | 222 | 26293 |
KRIT1 | 105 | 47132 | ZCCHC11 | 312 | 129797 |
LOC285989 | 86 | 14703 | ZNF32 | 25 | 5020 |