Figure 7
From: Reconstruction of an ancestral Yersinia pestisgenome and comparison with an ancient sequence
Dotplot between the late medieval Yersinia pestis genomes and the reconstructed ancestral sequence. The reconstructed chromosome was aligned to the 2134 ancient contigs, using megablast (default parameters, only hits with a length >102.5 were kept). Contigs are concatenated according to the reconstructed sequence, so the agreement is partly due to the fragmented nature of the ancient sequence. The contigs with hits departing from the diagonal are circled in red.