Table 4 The correlations between the propensity scores and PCPs including membrane single span helix, membrane multi-span helix and amino acid hydration energies.
Amino acid | score card | AAC of single span segment [40] | NAKH920108 | WOLR810101 | Hydration energy[43]. |
|---|---|---|---|---|---|
I-Ile | 571.9 | 3.46 | 13.73 | 2.15 | -10.9 |
F-Phe | 566.6 | 1.48 | 10.99 | -0.76 | -12.3 |
G-Gly | 552.8 | 1.27 | 6.17 | 2.39 | -14.5 |
V-Val | 526.1 | 2.46 | 12.43 | 1.99 | -11.6 |
A-Ala | 521.4 | 1.73 | 9.36 | 1.94 | -12 |
M-Met | 520.9 | 0.86 | 3.93 | -1.48 | -12.5 |
L-Leu | 490.2 | 2.56 | 16.64 | 2.28 | -11.3 |
T-Thr | 469.7 | 0.59 | 4.68 | -4.88 | -13.6 |
C-Cys | 468.5 | 0.84 | 2.56 | -1.24 | -13.1 |
Y-Tyr | 460.1 | 0.59 | 3.13 | -6.11 | -16.9 |
S-Ser | 433.5 | 0.49 | 5.58 | -5.06 | -14.8 |
N-Asn | 424.7 | 0.01 | 2.31 | -9.68 | -17.5 |
E-Glu | 422.8 | 0.01 | 0.94 | -10.2 | NA |
R-Arg | 415.6 | 0 | 0.27 | -19.92 | NA |
W-Trp | 411.6 | 0.74 | 2.2 | -5.88 | -15.2 |
D-Asp | 407.8 | 0.03 | 0.94 | -10.95 | NA |
Q-Gln | 407.1 | 0.03 | 1.14 | -9.38 | -17.9 |
H-His | 398.4 | 0.06 | 0.47 | -10.27 | -20 |
K-Lys | 398.3 | 0.03 | 0.58 | -9.52 | NA |
P-Pro | 396.4 | 0.18 | 1.96 | -3.68 | NA |
R1a | 1 | 0.82 | 0.78 | 0.79 | 0.79 |
R2b | 1 | 0.87 | 0.77 | 0.54 | 0.80 |