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Table 3

From: Precise genotyping and recombination detection of Enterovirus

Species

#Sequence

Region

#Genotype

Number (%) of Genotype Discrepancies

References

    

EVIDENCE

RIVM Genotyping Tool

 

Enterovirus A

49

5'UTR

2

0

49 (100%)

(49 only typed to species level)

[72]

 

59

VP1

8

0

0

[27, 28, 52, 53]

 

3

CG

3

0

0

[53]

Enterovirus B

101

VP1/VP2

22

6 (5.9%)

(4 seqs typed to species level, 2 mistyped)

6 (5.9%)

(4 seqs typed to species level, 2 mistyped)

[27, 28, 52]

Enterovirus C

13

VP1

6

1 (7.7%)

(mistyped)

2 (15.4%)

(1 seq typed to species level, 1 mistyped)

[27, 28]

Rhinovirus A

1

VP1

1

0

1 (100%)

(1 seq typed to species level)

[28]

Untypeable

5

VP1

NA

5 (100%)

(5 successfully typed)

5 (100%)

(1 seq typed to species level, 4 successfully typed)

[28]