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Table 3 The parameter estimates for Model 2.

From: Analysis of functional importance of binding sites in the Drosophila gap gene network model

Name

Hb

Kr

Gt

Kni

Bcd

Cad

Tll

Hkb

hb

86.06

−848.84

−95.87

−748.61

393.44

146.75

5332.19

−6810.68

Kr

−830.15

202.90

−1035.26

−582.73

50.25

1102.36

−903.17

−519.44

gt

−638.01

−3.19

322.91

−560.23

−2047.91

794.01

−470.24

−286.82

kni

−711.85

−614.20

−263.10

250.92

179.91

761.88

−693.47

−378.56

K

0.00026

0.019761

0.044755

0.003411

0.049165

0.041029

0.038283

0.008650

ω

1.000000

2.114257

4.741914

1.150665

1.000000

5.000000

1.298935

4.366262

Ï„

3.2

3.2

2.2

2.7

Nmax (q BTM ):

2 (3.7 × 10−6)

Range:

223

  1. Rows 2-5 present regulatory parameters Tab or target genes, while columns correspond to TFs. K, ω and τ are affinity, cooperativity and delay constants respectively. N max and q BTM are the number of activators interacting with the BTM and the BTM affinity constant respectively. Range is the range for repressor action in bps.
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BMC Genomics

ISSN: 1471-2164

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