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Table 2 omparison of different random forests models on the SNP pair data sets with different mtry values.

From: Genome-wide association data classification and SNPs selection using two-stage quality-based Random Forests

Data set Model mtry setting values Acc AUC
ALZ ts-RF M 45 .907 .975
  wsRF log 2 M 19 .561 .711
  wsRF (log2M)2 361 .654 .729
  wsRF M 616 .692 .757
  GRRF M 616 .657 .706
  RF log 2 M 19 .530 .623
  RF M 616 .632 .729
  RF .1M 38,015 .654 .732
  RF .5M 190,078 .663 .773
  SVM C 2−5 .690 .716
PAR ts-RF M p 22 .895 .959
  wsRF log 2 M 19 .754 .850
  wsRF M 638 .837 .917
  GRRF M 638 .688 .765
  RF log 2 M 19 .564 .722
  RF M 368 .799 .848
  RF .1M 40,880 .808 .879
  RF .5M 204,402 .827 .898
  SVM C 2−2 .825 .902
  1. Numbers in bold are the best results.