Skip to main content

Table 1 Intron Removal Criteria.

From: IRcall and IRclassifier: two methods for flexible detection of intron retention events from RNA-Seq data

T N 5 s s > 3
T N 3 s s > 3
T N c o v e r a g e > 0:9
T N e x o n > 1
T N e x p r e s s i o n > 10
T N i n t r o n > 1
C N e x p r e s s i o n > 10
C N J u n c > 1
C N e x o n > 1
T N e x p r e s s i o n C N e x p r e s s i o n < l o g 2 3 2 or T N e x p r e s s i o n C N e x p r e s s i o n > l o g 2 2 3