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Figure 4 | BMC Genomics

Figure 4

From: A structure-based Multiple-Instance Learning approach to predicting in vitrotranscription factor-DNA interaction

Figure 4

Correlation between 7-mer frequency and performance gain by MIL3D. Not considering TF Esr1 (the light blue, bottom left data point), for which both MIL3D and simple counting had low accuracy, a significant negative correlation (Pearson correlation coefficient = −0.61, p-value = 0.006) is observed between the total occurrence of the top-10 7-mers in the test sequences and the performance gain achieved by MIL3D. Color of data points represents the AUC by the simple counting method.

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BMC Genomics

ISSN: 1471-2164

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