Table 2 Subset of genes used to test the proposed database by the MLSA methodology.
Quantity of Strains | Quantity of Strains for Genes Used | Quantity Genes | Algorithm for the Multiple Sequence Alignment | Genes Used |
|---|---|---|---|---|
16 | 57 | 3 | CLUSTAL Omega | atpD, dnaK, glnll |
16 | 30 | 3 | CLUSTAL Omega | dnaK, recA, gyrB |
16 | 57 | 4 | CLUSTAL Omega | atpD, dnaK, glnll, recA |
16 | 57 | 3 | MUSCLE | atpD, dnaK, glnll |
16 | 30 | 3 | MUSCLE | dnaK, recA, gyrB |
16 | 57 | 4 | MUSCLE | atpD, dnaK, glnll, recA |