Figure 4
From: Direct ChIP-Seq significance analysis improves target prediction
Verification of promoter binding by PCR. Top predictions by both dIP and MACS were tested in two biological replicates, including common predictions, dIP-only predictions, and MACS-only predictions. As negative controls (grey) we tested predictions made uniquely by MACS with no control experiment input; error bars are given as S.E.M.