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Table 1 Area under the ROC curve (AUC) for DESeq and XBSeq under various conditions with different number of replicates (3 and 6 replicates), different number of differential expressed genes (500, 1500) and different level of fold change (1.5 fold and 3 fold). Fold change at 5 or higher yield AUC = 1.00 for all conditions.

From: Differential expression analysis of RNA sequencing data by incorporating non-exonic mapped reads

   DESeq XBSeq
Replicates per group   Fold Change Fold Change
  DEGs (%) 1.5x 3x 1.5x 3x
3 10% 0.90 1.00 0.90 1.00
  30% 0.89 1.00 0.89 1.00
6 10% 0.96 1.00 0.97 1.00
  30% 0.96 1.00 0.96 1.00
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