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Table 3 Percentage of each types of regulatory regions overlapped with different human genomic regions

From: Disease-associated variants in different categories of disease located in distinct regulatory elements

  Overlapping Coding Exon (bp) Overlapping Upstream (bp) Overlapping 3'-UTR (bp) Overlapping 5'-UTR (bp) Overlapping Introns (bp) Overlapping Downstream (bp) Overlapping Intergenic Regions (bp)
Transcription 318,864 1,033,885 235,904 793,623 948,521 202,588 1,747,482
promoter (8.32%) (26.97%) (6.15%) (20.7%) (24.74%) (5.23%) (45.58%)
Transcription 275 443,003 12,826 8,301 4,351,818 326,034 7,628,892
enhancer (0.002%) (3.58%) (0.1%) (0.07%) (35.14%) (2.63%) (61.6%)
Transcription 1,678,883 6,568,355 1,642,952 2,007,230 25,080,619 3,312,161 49,525,266
insulator (2%) (8.04%) (2%) (2.45%) (30.7%) (4.05%) (60.6%)
Methylation 961,891 3,066,144 790,094 850,738 5,552,194 1,039,107 10,745,614
region (4.93%) (15.71%) (4.04%) (4.36%) (28.45%) (5.32%) (55%)
Histone 19,836,913 65,289,808 27,693,911 13,261,068 901,286,244 69,178,945 1,820,842,829
modification region (0.7%) (2.32%) (1%) (0.47%) (32%) (2.46%) (64.64%)
Chromatin 14,486,785 45,832,380 20,066,412 9,708,604 464,537,271 46,072,176 761,585,471
physical interaction regions (1.12%) (3.56%) (1.6%) (0.75%) (36.05%) (3.58%) (59.1%)
DNA binding 5,252,509 22,329,204 6,553,411 5,567,759 130,492,231 14,945,226 224,621,692
sites of protein (1.38%) (5.87%) (1.7%) (1.46%) (34.3%) (3.93%) (59.06%)
Open 6,309,327 22,046,177 6,966,217 5,626,301 131,734,716 15,003,875 229,306,915
chromatin regions (DNase (1.63%) (5.69%) (1.8%) (1.45%) (34.02%) (3.88%) (59.23%)
I hypersensitive sites)        
Open 4,896,207 18,119,824 6,098,267 4,612,397 137,079,859 12,725,401 290,428,922
chromatin regions by (1.09%) (4.03%) (1.4%) (1.02%) (30.56%) (2.84%) (64.75%)
FAIRE-seq