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Table 2 Cancer genome databases and resources

From: Computational methods and resources for the interpretation of genomic variants in cancer

Resource URL Ref
Data repositories   
CGHub https://cghub.ucsc.edu [34]
COSMIC http://cancer.sanger.ac.uk [132]
ICGC https://dcc.icgc.org/ [133]
TCGA https://tcga-data.nci.nih.gov/ [38]
Cancer gene lists   
Bushman Lab http://www.bushmanlab.org/links/genelists [45]
Cancer Gene Census http://cancer.sanger.ac.uk/census [134]
TumorPortal http://cancergenome.broadinstitute.org/ [46]
Vogelstein List http://goo.gl/4EmFG6 (Table S2A) [9]
Cancer genome resources   
CaGe http://mgrc.kribb.re.kr/cage/ [60]
Cancer3D http://www.cancer3d.org/ [51]
Cancer Genomics Browser https://genome-cancer.ucsc.edu/ [59]
cBioPortal http://www.cbioportal.org/ [57]
DriverDB http://driverdb.ym.edu.tw/DriverDB [61]
IntOGen http://www.intogen.org/ [62]
NCG http://ncg.kcl.ac.uk/ [50]