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Table 1 Neurofibromatosis Type 1 splicing parameters.

From: Complex splicing pattern generates great diversity in human NF1 transcripts

Exon nr. Frame Score acceptor Score donor Branch point score Branch point position
Exon 1 IF   0.91   
Exon 2 IF 1.00 0.99 0.84 38
Exon 3 IF 0.79 1.00 0.99 31
Exon 4a OF 0.81 0.99 0.77 16
Exon 4b OF 1.00 1.00 0.97 41
Exon 4c OF 0.66 1.00 0.87 38
Exon 5 OF 0.99 0.99 0.74 49
Exon 6 OF 0.55 1.00 0.97 30
Exon 7 IF 0.64 0.93 0.87 23
Exon 8 IF 0.68 0.99 0.74 33
Exon 9 IF 1.00 0.99 0.90 37
Exon 9br IF 0.05 0.96 0.82 36
Exon 10a IF 0.98 0.99 0.92 47
Exon 10b IF 0.98 0.86 0.98 26
Exon 10c IF 0.99 0.99 0.82 27
Exon 11 OF 0.01 0.79 0.73 42
Exon 12a OF 0.23 1.00 0.82 36
Exon 12b IF 0.98 0.19 0.87 20
Exon 13 OF 0.72 0.99 0.71 28
Exon 14 OF 0.65 0.99 0.88 36
Exon 15 IF 0.97 1.00 0.88 34
Exon 16 IF 0.46 0.92 0.97 43
Exon 17 OF 0.99 1.00 0.82 35
Exon 18 IF 0.98 0.99 0.98 32
Exon 19a IF 0.98 0.94 0.67 43
Exon 19b IF 0.99 0.13 0.90 31
Exon 20 OF 0.96 0.79 0.82 43
Exon 21 OF 0.90 0.99 0.69 26
Exon 22 IF 0.99 0.92 0.99 23
Exon 23-1 OF 0.99 0.75 0.76 28
Exon 23-2 OF 1.00 0.98 0.74 38
Exon 23-a IF 0.95 0.98 0.90 15
Exon 24 IF 0.99 0.41 0.87 29
Exon 25 OF 0.91 0.88 0.98 29
Exon 26 IF 0.79 1.00 0.97 20
Exon 27a IF 0.49 0.53 0.97 31
Exon 27b IF 0.99 0.99 0.90 27
Exon 28 OF 1.00 0.98 0.97 32
Exon 29 OF 0.81 0.97 0.82 38
Exon 30 OF 0.98 0.96 0.75 18
Exon 31 OF 0.98 0.58 0.97 19
Exon 32 IF 0.78 0.99 0.77 33
Exon 33 OF 0.99 1.00 0.74 27
Exon 34 OF 0.93 0.41 0.76 24
Exon 35 OF 0.98 1.00 0.90 46
Exon 36 OF 0.56 0.89 0.72 28
Exon 37 IF 0.09 0.99 0.82 42
Exon 38 IF 0.93 1.00 0.89 29
Exon 39 OF 0.47 0.82 0.90 29
Exon 40 IF 1.00 0.70 0.89 35
Exon 41 OF 0.98 1.00 0.84 23
Exon 42 OF 0.98 0.73 0.82 27
Exon 43 IF 0.99 0.77 0.84 14
Exon 44 OF 0.91 0.71 0.82 28
Exon 45 OF 0.52 0.96 0.74 20
Exon 46 OF 1.00 0.63 0.90 34
Exon 47 OF 0.80 1.00 0.82 11
Exon 48 OF 0.82 0.98 0.90 16
Exon 48 a IF 0.16 0.90 0.89 32
Exon 49 OF 1.00   0.78 24
NF1-insE4a-2 OF 0.51 0.99 0.90 10
NF1-Δ100_835 OF 0.81 0.48 0.87 13
NF1-Δ64_1530 IF / / 0.82 30
NF1-Δ1744_2823 IF / / 0.84 20
NF1-Δ1760_2916 OF / / 0.83 41
NF1-Δ2410_2638 OF 0.03 1.00 0.69 24
NF1-Δ2618_2850 OF 0.99 0.95 0.82 35
NF1-Δ2671_3086 OF / / 0.77 20
NF1-Δ2761_3258 IF 0.81 0.07 0.77 25
NF1-Δ3315_3353 IF / 0.13 0.80 41
NF1-3975+10325ins78 IF 0.76 0.99 0.92 32
NF1-4515-14ins14 OF 0.92 1.00 0.97 17
NF1-4772+48940ins89 OF 0.01 0.93 0.77 22
NF1-4772+15759ins51 IF 0.14 0.98 0.90 30
NF1-Δ4773_5065 OF 0.84 0.99 1.00 37
NF1-Δ5152_6937 OF 0.47 0.72 0.82 24
NF1-Δ5206_6937 OF 0.47 0.98 0.82 24
NF1-Δ5701_6946 OF / / 0.82 33
NF1-5749+3800ins67 OF 0.28 0.35 0.89 28
NF1-Δ6365_6479 OF 0.82 1.00 0.69 17
NF1-Δ6859_6934 OF / 0.99 0.82 21
NF1-7126+4386ins111 IF 0.52 0.95 0.78 44
NF1-Δ7605_7675 OF 0.91 / 0.82 22
NF1-8314+1584ins77 OF 0.99 0.92 0.80 20
  1. '/': No score can be obtained by SSPNN, not even at the lowest threshold. Exons in bold were detected to skip as individual exon in some transcripts. Underscored scores have values of <0.70.