From: Complex splicing pattern generates great diversity in human NF1 transcripts
Exon nr. | Frame | Score acceptor | Score donor | Branch point score | Branch point position |
---|---|---|---|---|---|
Exon 1 | IF | Â | 0.91 | Â | Â |
Exon 2 | IF | 1.00 | 0.99 | 0.84 | 38 |
Exon 3 | IF | 0.79 | 1.00 | 0.99 | 31 |
Exon 4a | OF | 0.81 | 0.99 | 0.77 | 16 |
Exon 4b | OF | 1.00 | 1.00 | 0.97 | 41 |
Exon 4c | OF | 0.66 | 1.00 | 0.87 | 38 |
Exon 5 | OF | 0.99 | 0.99 | 0.74 | 49 |
Exon 6 | OF | 0.55 | 1.00 | 0.97 | 30 |
Exon 7 | IF | 0.64 | 0.93 | 0.87 | 23 |
Exon 8 | IF | 0.68 | 0.99 | 0.74 | 33 |
Exon 9 | IF | 1.00 | 0.99 | 0.90 | 37 |
Exon 9br | IF | 0.05 | 0.96 | 0.82 | 36 |
Exon 10a | IF | 0.98 | 0.99 | 0.92 | 47 |
Exon 10b | IF | 0.98 | 0.86 | 0.98 | 26 |
Exon 10c | IF | 0.99 | 0.99 | 0.82 | 27 |
Exon 11 | OF | 0.01 | 0.79 | 0.73 | 42 |
Exon 12a | OF | 0.23 | 1.00 | 0.82 | 36 |
Exon 12b | IF | 0.98 | 0.19 | 0.87 | 20 |
Exon 13 | OF | 0.72 | 0.99 | 0.71 | 28 |
Exon 14 | OF | 0.65 | 0.99 | 0.88 | 36 |
Exon 15 | IF | 0.97 | 1.00 | 0.88 | 34 |
Exon 16 | IF | 0.46 | 0.92 | 0.97 | 43 |
Exon 17 | OF | 0.99 | 1.00 | 0.82 | 35 |
Exon 18 | IF | 0.98 | 0.99 | 0.98 | 32 |
Exon 19a | IF | 0.98 | 0.94 | 0.67 | 43 |
Exon 19b | IF | 0.99 | 0.13 | 0.90 | 31 |
Exon 20 | OF | 0.96 | 0.79 | 0.82 | 43 |
Exon 21 | OF | 0.90 | 0.99 | 0.69 | 26 |
Exon 22 | IF | 0.99 | 0.92 | 0.99 | 23 |
Exon 23-1 | OF | 0.99 | 0.75 | 0.76 | 28 |
Exon 23-2 | OF | 1.00 | 0.98 | 0.74 | 38 |
Exon 23-a | IF | 0.95 | 0.98 | 0.90 | 15 |
Exon 24 | IF | 0.99 | 0.41 | 0.87 | 29 |
Exon 25 | OF | 0.91 | 0.88 | 0.98 | 29 |
Exon 26 | IF | 0.79 | 1.00 | 0.97 | 20 |
Exon 27a | IF | 0.49 | 0.53 | 0.97 | 31 |
Exon 27b | IF | 0.99 | 0.99 | 0.90 | 27 |
Exon 28 | OF | 1.00 | 0.98 | 0.97 | 32 |
Exon 29 | OF | 0.81 | 0.97 | 0.82 | 38 |
Exon 30 | OF | 0.98 | 0.96 | 0.75 | 18 |
Exon 31 | OF | 0.98 | 0.58 | 0.97 | 19 |
Exon 32 | IF | 0.78 | 0.99 | 0.77 | 33 |
Exon 33 | OF | 0.99 | 1.00 | 0.74 | 27 |
Exon 34 | OF | 0.93 | 0.41 | 0.76 | 24 |
Exon 35 | OF | 0.98 | 1.00 | 0.90 | 46 |
Exon 36 | OF | 0.56 | 0.89 | 0.72 | 28 |
Exon 37 | IF | 0.09 | 0.99 | 0.82 | 42 |
Exon 38 | IF | 0.93 | 1.00 | 0.89 | 29 |
Exon 39 | OF | 0.47 | 0.82 | 0.90 | 29 |
Exon 40 | IF | 1.00 | 0.70 | 0.89 | 35 |
Exon 41 | OF | 0.98 | 1.00 | 0.84 | 23 |
Exon 42 | OF | 0.98 | 0.73 | 0.82 | 27 |
Exon 43 | IF | 0.99 | 0.77 | 0.84 | 14 |
Exon 44 | OF | 0.91 | 0.71 | 0.82 | 28 |
Exon 45 | OF | 0.52 | 0.96 | 0.74 | 20 |
Exon 46 | OF | 1.00 | 0.63 | 0.90 | 34 |
Exon 47 | OF | 0.80 | 1.00 | 0.82 | 11 |
Exon 48 | OF | 0.82 | 0.98 | 0.90 | 16 |
Exon 48 a | IF | 0.16 | 0.90 | 0.89 | 32 |
Exon 49 | OF | 1.00 | Â | 0.78 | 24 |
NF1-insE4a-2 | OF | 0.51 | 0.99 | 0.90 | 10 |
NF1-Δ100_835 | OF | 0.81 | 0.48 | 0.87 | 13 |
NF1-Δ64_1530 | IF | / | / | 0.82 | 30 |
NF1-Δ1744_2823 | IF | / | / | 0.84 | 20 |
NF1-Δ1760_2916 | OF | / | / | 0.83 | 41 |
NF1-Δ2410_2638 | OF | 0.03 | 1.00 | 0.69 | 24 |
NF1-Δ2618_2850 | OF | 0.99 | 0.95 | 0.82 | 35 |
NF1-Δ2671_3086 | OF | / | / | 0.77 | 20 |
NF1-Δ2761_3258 | IF | 0.81 | 0.07 | 0.77 | 25 |
NF1-Δ3315_3353 | IF | / | 0.13 | 0.80 | 41 |
NF1-3975+10325ins78 | IF | 0.76 | 0.99 | 0.92 | 32 |
NF1-4515-14ins14 | OF | 0.92 | 1.00 | 0.97 | 17 |
NF1-4772+48940ins89 | OF | 0.01 | 0.93 | 0.77 | 22 |
NF1-4772+15759ins51 | IF | 0.14 | 0.98 | 0.90 | 30 |
NF1-Δ4773_5065 | OF | 0.84 | 0.99 | 1.00 | 37 |
NF1-Δ5152_6937 | OF | 0.47 | 0.72 | 0.82 | 24 |
NF1-Δ5206_6937 | OF | 0.47 | 0.98 | 0.82 | 24 |
NF1-Δ5701_6946 | OF | / | / | 0.82 | 33 |
NF1-5749+3800ins67 | OF | 0.28 | 0.35 | 0.89 | 28 |
NF1-Δ6365_6479 | OF | 0.82 | 1.00 | 0.69 | 17 |
NF1-Δ6859_6934 | OF | / | 0.99 | 0.82 | 21 |
NF1-7126+4386ins111 | IF | 0.52 | 0.95 | 0.78 | 44 |
NF1-Δ7605_7675 | OF | 0.91 | / | 0.82 | 22 |
NF1-8314+1584ins77 | OF | 0.99 | 0.92 | 0.80 | 20 |