Skip to main content

Table 1 Genomic structure of human peptide transporter (SLC15A1) showingnumber of exons, cDNA position, exon size, exon-intron junctions, 3' & 5' intron acceptor & donor sites, intron size and intron phase.

From: Mutation screening of two candidate genes from 13q32 in families affected with Bipolar disorder: human peptide transporter (SLC15A1) and human glypican5 (GPC5)

Exon cDNA bp Position Exon Size Intron-Exon Junctions Intron Size bp Intron Phase
  Intron 3'
acceptor
Exon Intron 5'
donor
    
1 2–61 61 CACCTG...CCATGGgt acgctc >25 kb 1
2 61–77 16 tcttttag GAATGTTCACACgt gagtac 394 2
3 78–159 81 tgtcgaAG TTTCTTT... TGCGAGgt aactgta 102 1
4 158–302 144 tgcaaaag CAATCC... GTTCAAgt gagtgc 2091 2
5 302–422 120 aaacacag GACCAT..GCACGTgt gagttg 2008 2
6 422–522 100 tttcccag GGTGCT... GGCCAGgt aagggt 215 0
7 519–611 92 cattgcag GAGAAA... TCAGAGgt aagaga 2173 2
8 611–696 85 ctccccag TTCAAC...CCCTGAgt aagtgg 3277 1
9 697–779 82 ctatctag TTGTGT.....ATCGGTgt aagtat 3294 0
10 780–867 87 ttccttcag TTTGCC...TACGATgt aagtaac 554 0
11 867–957 90 aactacag GAGCGG...CAGCAGgt aatgtg 1940 0
12 955–1002 47 atttttaag GGCTCC...GAAATCgt aagtttg 92 0
13 1002–1034 32 tctttttag GGAGCTATGCAGgt agaagac 77 0
14 1030–1123 93 cctctgcag ACCGTG...TTTCAC gt aggttga 801 2
15 1120–1205 85 tgccatcag CTCCTT...ATCGATgt gagttgt 2433 0
16 1206–1325 119 tttgctcag AAAACT...TCTCAAgt aagtaga 1699 0
17 1326–1476 150 ctctatag ACAAAT...CAGGTGgt aagtgtg 1755 2
18 1472–1522 50 tctctcag GTAAAG...AATCAGgt atgtata >13 kb 2
19 1519–1630 111 tgtttcag ATTTGT.....TGGCATgt aagtac 114 2
20 1631–1739 108 tttgatag AAAAGG...AGGAAGgt tagtaa 522 0
21 1738–1884 146 tgctgcag AATGAC.... TCTCAGgt ttcttg 1279 0
22 1879–1991 112 ttcctcag GCTCCT...AAACAGgt atggcg 1273 0
23 1990–3105 1115 cttcaaag TGGGCC...CTGTTCTTA