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Table 2 PCR primer sequences

From: Partial duplication of the APBA2 gene in chromosome 15q13 corresponds to duplicon structures

Exon

Exon Size (bp)

 

Primers

Ta (°C)

Product Size (bp)

1

117

F

5'-GAGCGTGTGGCCCATCGTT-3'

57

291

  

R

5'-AGCACATCAGCCCAGACTCATTCA-3'

  

2

53

F

5'-CATTTTTATACTTGAAGGAGCTCT-3'

50

163

  

R

5'-GCTGCCTTGTATTTCTTACCTAA-3'

  

3

991

F

5'-TGTGGGGTTTTGACTCTGTCCTTCC-3'

60

1098

  

R

5'-GTACCCTGAGGTCCCTTGCTCTCG-3'

  

4

83

F

5'-CTTTAACTTCCCCGTTTCCAGGTTTG-3'

57

137

  

R

5'-TCCAGCCCAGAACTCTCATCCTTGAA-3'

  

5

38

F

5'-GCATATTCAGGTTTTGCATCTTGC-3'

54

185

  

R

5'-CAGCCCAGAACTCTCATCCTTGAA-3'

  

6

146

F

5'-CCTGGCTGCCGTGTTCCTTGTG-3'

61

316

  

R

5'-CGCCATATTCCCTCCTGCTAGTGC-3'

  

7

34

F

5'-AGACCTGAGAGTGGGGGCATCAAC-3'

57

276

  

R

5'-TCACCTACCAAGGGAAGAGGAAAAGC-3'

  

8

88

F

5'-TCTGGTGATTAGGGATGTTGAGCA-3'

55

259

  

R

5'-ATACCATGGGACAAGAAGGAGTCG-3'

  

9

189

F

5'-CCACCATGCCCAGCCCTGGAGTAC-3'

64

313

  

R

5'-GCTGTGAACTTTGGGAGGGGAGTGC-3'

  

10

179

F

5'-CCTGTGCCACGTGCCTGTCTCCAG-3'

62

253

  

R

5'-CCTCCCTGAGGCTGGTGGGTGTGG-3'

  

11

215

F

5'-TCCTCCTGTGGGTCCTTGGCAGAG-3'

64

345

  

R

5'-GGGGATGAAGTGAGGCAGGGTTGA-3'

  

12

121

F

5-TAAAGCCCAGCCTGTGACTCCTGTCC-3'

62

251

  

R

5'-CCAGACATAGCCTGCCCCATTGGA-3'

  

13

140

F

5'-CTGTCGGGTGTGGCGGGAACACGT-3'

64

275

  

R

5'-CTCTGGAGCGGGGGAGGCTCATGG-3'

  

14

1251

F

5'-GCGGCTCAGCCTCCTGTTTCTGTC-3'

62

200

  

R

5'-CTGTGGCGTCGGGGTCAAGTCTGC-3'

  
  1. Forward (F) and reverse (R) oligonucleotide sequences are shown along with annealing temperatures (Ta) and PCR product size