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Table 1 Predicted positions of ori and ter of sequenced bacterial chromosomes

From: Wavelet to predict bacterial ori and ter: a tendency towards a physical balance

    Predicted Reported ori-ter d Quality
    Position b Positionc Degree  
Bacterial strain G.I.a Genome size (bp) ori ter ori ter   Keto Purine
Bacillus halodurans C-125 BA000004 4202353 3462 2062112 N/A N/A 174 Weak Strong
Bacillus subtilis AL009126 4214810 359 1941675 1 2017000 169 Strong Strong
Borrelia burgdorferi AE000783 910725 458751 910649 460000 N/A 179 strong Weak
Campylobacter jejuni AL11168 1641481 1607245 829145 N/A N/A 189 Strong Weak
Caulobacter crescentus AE005673 4016947 18744 1922444 1 N/A 171 Strong Weak
Chlamydia muridarum AE002160 1069411 311 520681 N/A N/A 176 Strong Strong
Chlamydia trachomatis AE001273 1042519 720352 201311 N/A N/A 181 Strong Strong
Chlamydophila pneumoniae AR39 AE002161 1229853 349 622737 N/A N/A 183 Strong Weak
Chlamydophila pneumoniae CWL029 AE001363 1230230 841233 218525 N/A N/A 177 Strong Weak
Chlamydophila pneumoniae J138 BA000008 1228267 840884 218478 N/A N/A 177 Strong Weak
Escherichia coli K12 U00096 4639221 3921168 1606253 3923000 1603000 180 Strong Strong
Escherichia coli O157-H7 EDL933 AE005174 5528445 4786037 1974813 4788169 1102902 183 Strong Strong
Escherichia coli O157-H7 Sakai-VT2 BA000007 5498450 4716984 2113730 4719188 1414737 189 Strong Strong
Haemophilus influenzae L42023 1830138 616817 1475181 N/A 1518000 169 Strong Weak
Helicobacter pylori 26695 AE000511 1667867 1589717 683947 N/A N/A 165 Strong Weak
Helicobacter pylori J99 AE001349 1643831 142182 896905 N/A N/A 166 Strong Weak
Lactococcus lactis AE005167 2365589 26262 1293666 N/A N/A 193 Weak Strong
Mesorhizobium loti NC_002678 7036074 3944132 148671 N/A N/A 166 Strong Weak
Mycobacterium leprae AL450380 3268203 1833 1707503 N/A N/A 188 Strong Weak
Mycobacterium tuberculosis AL123456 4403836 1784 2084147 N/A N/A 171 Strong Weak
Mycobacterium tuberculosis H37R AE000516 4411529 1784 2086919 N/A N/A 171 Strong Weak
Mycoplasma genitalium NC_000908 580074 349919 95535 N/A N/A 202 Weak Strong
Neisseria meningitidis MC58 AE002098 2272351 13698 1241287 N/A N/A 195 Strong Strong
Neisseria meningitidis Z2491 AL157959 2184406 247606 1307356 N/A N/A 175 Strong Strong
Pseudomonas aeruginosa AE004091 6264403 5852734 2586738 N/A N/A 172 Strong Strong
Rickettsia conorii NC_003103 1268823 1243683 607194 N/A N/A 180 Strong Weak
Salmonella typhi CT18 AE006469 4809037 3765414 1486510 3765000 1437000 189 Strong Strong
Salmonella typhimurium LT2 BA000017 4857432 4083786 1635863 N/A N/A 178 Strong Strong
Sinorhizobium meliloti NC_002745 3654135 3476969 1718933 N/A N/A 186 Strong Weak
Staphylococcus aureus Mu50 AE004092 2878040 1749987 361672 N/A N/A 186 Weak Strong
Staphylococcus aureus N315 AE006641 2813695 1750052 349713 N/A N/A 181 Weak Strong
Streptococcus pneumoniae TIGR4 AB001339 2160837 2504 1065319 N/A N/A 177 Weak Strong
Streptococcus pyogenes AE000512 1852441 12348 963378 N/A N/A 185 Weak Strong
Treponema pallidum AE000520 1138011 3306 556361 N/A N/A 175 Strong Weak
Ureaplasma urealyticum NC_002162 751719 40119 411530 N/A N/A 178 Weak Strong
Vibrio cholerae AE003852 2961149 2959988 1573399 N/A N/A 192 Strong Strong
  1. Note: a, G.I., GenInfo Identifiers. b, Predicted position, minimum (ori) and maximum (ter), see details in text. c, Reported position, oriC and terC positions reported by the authors. d, ori-ter (Degree), physical distance of the predicted ori and ter in degree clockwise from ori to ter. e, Quality, keto and purine excesses with minimum and maximum clearly (strong) or not clearly (weak) shown on the curves, see the text and Figures 5, 6 and 7.