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Table 2 Genes more highly expressed in LD than in psoas

From: Development of a porcine skeletal muscle cDNA microarray: analysis of differential transcript expression in phenotypically distinct muscles

Gene LD/Psoas Homology # of clones Accession #
Mitochondrial origin     
Ribosomal protein L35A 2.2 86% (H) 1 AK055653
Ribosomal protein L7a 1.85 90% (H) 1 BC005128
Ribosomal protein S23 1.91 88% (R) 1 X77398
Ribosomal protein S12 1.61 100% (S) 1 X79417
Sarcomeric / structural     
Myosin heavy chain fast 2a 1.91 100% (S) 6 AB025260
Myosin heavy chain fast 2x 1.77 100% (S) 2 AB025262
Myosin heavy chain fast 2b 1.88 97% (S) 2 AB025261
Myosin regulatory light chain 2 2.95 91% (H) 2 AF363061
Alpha actinin 3 1.47 93% (H) 2 M86407
S-nexilin 1.77 70% (H) 1 AK057954
Fast skeletal troponin C 1.67 94% (O) 1 Y00760
Fast skeletal troponin T (TnT3) 1.7 93% (B) 3 AB085599
Alpha-1 skeletal actin (ACTA1) 1.53 93% (H) 2 BC012597
Alpha-2 smooth muscle actin (ACTA2) 1.62 96% (H) 1 BC017554
Non-sarcomeric     
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (SERCA1) (g) 1.54 98% (S) 3 AY027797
Aldolase A (g) 1.47 87% (H) 1 BC010660
Phosphoglycerate kinase (g) 1.48 88% (H) 1 V00572
Glyceraldehyde-3-phosphate dehydrogenase (g) 1.53 100% (S) 1 X94251
Muscle pyruvate kinase (PKM2) (g) 1.63 91% (H) 1 BC007952
Phosphoglucomutase isoform 2 (PGM) (g) 1.81 94% (O) 1 M97664
Muscle glycogen phosphorylase (g) 1.65 92% (O) 2 X04265
Adenylate kinase isozyme 1 (myokinase) (g) 1.51 87% (S) 1 E03007
Calsequestrin (c) 1.7 83% (C) 2 J03766
Polyubiquitin (tl) 1.51 90% (A) 1 AF038129
Bridging-integrator protein-1 (bin1) (s) 2.17 85% (H) 1 AF001383
Myomegalin-like protein (u) 6.94 94% (H) 1 AB042557
Heat shock cognate protein (HSPA8) (u) 1.77 93% (B) 1 X53827
Unknown clone, homologous to Homo sapiens clone HSPCO40 (u) 2.08 86% (H) 1 BC000810
Unknown clone, homologous to 3' UTR of Homo sapiens *actin bundling protein (u) 1.99 *77% (H) 1 *U09873
  1. Associated or possible role: (g), glycolysis; (c), contraction; (tl), translation; (s), signalling; (u) unknown. Accession # refers to porcine gene or close homologue. Genus abbreviations as in Table 1.