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Table 3 Oligonucleotides and TaqMan fluorogenic probes

From: Development of a porcine skeletal muscle cDNA microarray: analysis of differential transcript expression in phenotypically distinct muscles

Gene

Primer

Sequence 5'→3'

β-actin

S

CCA GCA CCA TGA AGA TCA AGA TC

 

A

ACA TCT GCT GGA AGG TGG ACA

 

Ps

CCC CTC CCG AGC GCA AGT ACT CC

GAPDH

S

AGG CTC GGG CTC ACT TGA A

 

A

TGC CCA TCA CAA ACA TGG G

 

Ps

AGC CAA AAG GGT CAT CAT CTC TGC CC

MyHC 2b

S

CAC TTT AAG TAG TTG TCT GCC TTG AG

 

A

GGC AGC AGG GCA CTA GAT GT

 

Ps

TGC CAC CGT CTT CAT CTG GTA ACA TAA GAG G

Bin1

S

GCC AGC AAT GTG CAG AAG AA

 

A

CAT CTG CCT TCC CCA GTT TC

 

Pa

CCT TCT CCT GCG CGC GAG TGA G

Novel gene (kc2725)

S

TTT TTT CCA TTC CCT GGT TGA

 

A

AGG GAC CCT GTA AGC CAA CA

 

Ps

CCA GTC TGG TGG CCT AGT CAT GCC C

  1. S, sense; A, antisense, Ps, TaqMan sense probe; Pa, TaqMan antisense probe