Refined physical map of the human PAX2/HOX11/NFKB2 cancer gene region at 10q24 and relocalization of the HPV6AI1 viral integration site to 14q13.3-q21.1

Table 1 Order and Frequency of Probe Signal Patterns on Interphase Nuclei after FISH

Probe Combination (Detection Color¹)			Signal Order [No. scored (%)]
			Red-Gr-Red	Red-Red-Gr	Red-Gr-Gr	Gr-Red-Gr
10D15^b(R)	+ 10D14^d (Gr)	+ 10E3^b (R)	38 (69%)	17 (31%)
10D15^b(R)	+ 10D14^b (R)	+ 10E3^d (Gr)	23 (26%)	66 (74%)
10D14^b (R)	+ 10E3^d (Gr)	+ 29CD5 (PAX2)^d (Gr)			75 (99%)	1 (1%)
10D14^d (Gr)	+ 10E3^b (R)	+ 29CD5 (PAX2)^d (Gr)			25 (30%)	58 (70%)
10D14^d (Gr)	+ 10E3^d (Gr)	+ 165f21 (PAX2)^b (R)			67 (75%)	22 (25%)
10D14^b (R)	+ 165f21 (PAX2)^b (R)	+ CosC2^d (Gr)	13 (18%)	61 (82%)
10D14^b (R)	+ 165f21 (PAX2)^d (Gr)	+ CosC2^d (Gr)			79 (95%)	4 (5%)
165f21 (PAX2)^d (Gr)	+ CosC2^b (R)	+ λSh3F (HOX11)^d (Gr)			7 (18%)	32 (82%)
10D14^b (R)	+ CosC2^d (Gr)	+ λlyt-10 (LYT-10)^d (Gr)			76 (82%)	17 (18%)
10D14^b (R)	+ CosC2^b (R)	+ λlyt-10 (LYT-10)^d (Gr)	22 (25%)	67 (75%)

¹R, red; Gr, Green; ^b Biotin labelled. ^d Digoxygenin labelled. Probe combinations represented correspond to Figures 2a,2b,2d,2e,2f,2g,2h,2i,2k and 2l, respectively.

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