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Table 3 Relative expression levels obtained by real-time quantitative RT-PCR: Quantitative RT-PCR results in 30 NB cell lines and 9 normal human tissue samples (- : not tested; samples with gene amplification are marked in bold-italics).

From: Combined subtractive cDNA cloning and array CGH: an efficient approach for identification of overexpressed genes in DNA amplicons

Sample MYCN TEM8 DDX1 NAG g10e3 g10d12 g4d5 MEIS1
CHP134 1.79E+00 2.40E-01 5.13E+00 2.13E+00 1.21E-01 1.60E-03 4.08E-03 2.39E+00
CHP901 9.72E-01 1.04E-01 1.71E-02 8.94E-02 9.57E-02 6.24E-03 0.00E+00 4.28E-01
CLB-GA 5.35E-02 3.08E-01 1.10E-01 4.19E-01 2.08E-01 2.69E-02 9.98E-03 5.42E-01
GI-ME-N 9.37E-05 4.53E-01 4.95E-02 2.09E-01 2.71E-01 9.83E-03 0.00E+00 1.27E-01
IMR-32 2.00E+00 1.48E+01 2.94E+00 8.78E+00 2.84E+01 1.81E+01 4.06E+01 3.66E+00
LA-N-1 2.31E+00 4.21E-01 4.64E+00 1.39E-01 1.06E-01 2.84E-03 5.01E-02 3.09E-01
LA-N-5 1.16E+00 3.17E-01 2.15E+00 3.95E-01 1.38E-01 2.56E-02 0.00E+00 5.62E-01
LA-N-6 6.93E-03 1.71E-01 1.09E-01 4.72E-01 8.31E-02 2.94E-02 1.99E-02 1.53E-01
N206 2.79E+00 2.22E-01 1.49E-01 4.91E-01 7.35E-01 1.09E-01 1.21E-01 6.48E-01
NBL-S 1.32E-01 3.67E-01 7.35E-02 3.63E-01 4.96E-01 5.28E-02 7.37E-02 6.96E-01
NGP 5.86E+00 1.14E-01 1.25E-01 1.03E+00 2.91E-01 1.10E-02 0.00E+00 1.85E+00
NLF 3.99E-01 1.21E+00 2.91E+00 3.10E-01 2.20E-02 1.38E-02 0.00E+00 2.38E+00
NMB 1.65E+00 8.94E-01 9.47E-02 2.78E-01 5.41E-01 2.15E-02 3.00E-02 1.23E+00
SJNB-1 5.14E-02 4.14E-01 6.76E-02 1.98E-01 3.83E-01 3.26E-02 5.34E-02 3.16E-01
SJNB-10 2.16E+00 2.56E-01 4.89E-02 2.63E-01 1.16E-01 1.92E-02 9.66E-02 1.94E-01
SJNB-12 4.70E-06 3.11E-01 8.89E-02 2.46E-01 3.96E-01 1.60E-02 5.48E-03 1.14E+00
SJNB-6 1.44E+00 2.19E-01 4.61E-02 4.91E-01 4.12E-01 1.44E+00 4.37E-02 7.26E-01
SJNB-8 2.99E+00 6.71E-01 6.26E+00 3.40E-01 3.57E-01 0.00E+00 5.35E-02 3.47E+00
SK-N-AS 2.39E-03 7.89E-01 6.05E-02 1.76E-01 4.54E-03 7.46E-03 2.39E-01 2.63E+00
SK-N-BE 5.31E-01 7.13E-02 8.12E-02 3.30E-01 1.50E-01 3.60E-02 7.36E-02 1.49E-01
SK-N-FI 9.22E-02 8.44E-01 3.69E-02 1.24E-01 7.22E-03 0.00E+00 3.18E-02 2.73E-01
SK-N-SH 3.90E-03 1.88E+00 7.43E-02 2.36E-01 1.01E-01 1.12E-02 2.23E-02 3.78E-01
SMS-KAN 4.59E+00 3.10E-01 5.93E-02 1.55E-01 1.39E-01 6.69E-03 3.03E-02 2.41E+00
SMS-KCNR 2.96E+00 2.61E-01 1.42E-01 2.34E-01 2.42E-01 1.41E-02 0.00E+00 1.03E+00
STA-NB-10 7.28E-01 1.37E+00 3.05E+00 1.90E-01 1.21E-01 7.30E-03 0.00E+00 2.64E-01
STA-NB-12 5.60E-01 - 7.45E-02 3.49E-01 8.12E-02 0.00E+00 6.47E-02 3.14E-01
STA-NB-3 9.82E-01 2.39E-01 8.67E+00 1.59E+01 4.86E-01 0.00E+00 2.22E-01 7.43E-01
STA-NB-8 2.30E-01 5.44E+00 1.04E+00 6.26E-01 6.99E-02 1.38E-02 9.05E-02 5.20E-01
TR-14 1.61E+00 3.59E-01 4.11E-02 1.63E-01 4.47E-02 0.00E+00 1.75E-02 2.00E-01
UHG-NP 2.09E+00 1.91E-01 6.96E-02 6.09E-01 2.04E-01 4.86E-02 8.88E-02 3.58E-01
Human brain 9.74E-03 2.11E-01 - - - 0.00E+00 5.68E-02 1.16E-01
Human fetal brain - - - - - 6.95E-02 0.00E+00 2.20E-01
Human heart 1.67E-03 1.78E-01 1.20E-01 5.13E-01 5.18E-02 0.00E+00 3.44E-02 3.75E-01
Human kidney 3.53E-02 1.37E-01 9.06E-02 4.21E-01 2.06E-01 3.27E-02 6.82E-02 6.12E-01
Human liver 1.91E-03 1.26E-01 1.20E-01 3.89E-01 1.73E-01 0.00E+00 7.45E-02 5.94E-01
Human lung 6.61E-03 1.94E+00 6.95E-02 3.82E-01 7.77E-01 2.18E-02 1.05E-01 1.10E+00
Human mammery gland - - - - - 4.63E-02 4.10E-02 9.39E-01
Human trachea 1.19E-02 3.81E-01 1.90E-02 2.06E-01 1.11E+00 0.00E+00 6.02E-02 1.09E+00
Human uterus - - - - - 4.34E-02 2.55E-01 6.70E+00