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Table 1 Top 50 PWMs for chromosome 20 sorted by cluster score S in descending order. Each column represents rank number, accession number in TRANSFAC, identifier in TRANSFAC, cluster score, and threshold.

From: Assessment of clusters of transcription factor binding sites in relationship to human promoter, CpG islands and gene expression

Rank ACCESSION ID S T
1 M00736 E2F1DP1_01 189.3 2.75
2 M00332 WHN_B 176.0 1.90
3 M00652 NRF1_Q6 122.0 0.93
4 M00649 MAZ_Q6 117.2 4.35
5 M00491 MAZR_01 111.4 1.78
6 M00739 E2F4DP2_01 103.8 0.93
7 M00737 E2F1DP2_01 103.6 0.94
8 M00108 NRF2_01 81.4 0.92
9 M00665 SP3_Q3 72.1 2.39
10 M00706 TFIII_Q6 61.4 4.23
11 M00740 E2F1DP1RB_01 58.4 0.90
12 M00324 MINI20_B 58.2 1.61
13 M00032 CETS1P54_01 57.3 3.70
14 M00743 CETS168_Q6 51.1 1.75
15 M00341 GABP_B 48.6 0.88
16 M00055 NMYC_01 41.1 0.90
17 M00329 PAX9_B 39.2 0.73
18 M00243 EGR1_01 37.3 0.87
19 M00072 CP2_01 36.5 1.66
20 M00054 NFKAPPAB_01 35.5 0.85
21 M00056 MYOGNF1_01 35.1 1.34
22 M00694 E4F1_Q6 35.0 0.86
23 M00738 E2F4DP1_01 34.9 0.91
24 M00143 PAX5_01 34.7 0.84
25 M00235 AHRARNT_01 34.6 0.92
26 M00698 HEB_Q6 33.6 0.91
27 M00039 CREB_01 33.6 1.00
28 M00514 ATF4_Q2 33.1 1.71
29 M00650 MTF1_Q4 31.4 0.88
30 M00194 NFKB_Q6 30.8 0.82
31 M00007 ELK1_01 30.0 0.85
32 M00733 SMAD4_Q6 29.7 0.81
33 M00261 OLF1_01 28.8 0.84
34 M00017 ATF_01 26.7 0.98
35 M00053 CREL_01 25.6 0.81
36 M00691 ATF1_Q6 25.5 0.89
37 M00244 NGFIC_01 25.2 0.88
38 M00041 CREBP1CJUN_01 24.9 1.00
39 M00086 IK1_01 24.2 0.90
40 M00287 NFY_01 24.0 1.95
41 M00466 HIF1_Q5 22.7 0.90
42 M00634 GCM_Q2 22.6 0.84
43 M00273 R_01 21.8 0.85
44 M00373 PAX4_01 21.7 2.57
45 M00097 PAX6_01 21.5 1.15
46 M00134 HNF4_01 21.1 0.64
47 M00670 TCF1P_Q6 21.1 0.80
48 M00057 COMP1_01 21.1 0.59
49 M00035 VMAF_01 21.0 1.32
50 M00222 HAND1E47_01 20.3 0.81
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