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Table 3 R.Y tracts in selected chromosomes. The numbers give for each length the number of found tracts divided by the number expected tracts, eq (1).

From: The over-representation of binary DNA tracts in seven sequenced chromosomes

 

H. sap. 22, contig 23

H. sap. 21, contig 28

D. mel. IIR

C. eleg. I

A. thal. II

S. cer. IV

M. jan.

Control

Bases:

22,998,450

28,515,322

20,302,755

14,752,005

19,647.091

1,531,929

1,664,970

5 × 1 Mb

%A,G:

50.0

50.1

50.0

50.0

49.9

50.1

50.3

50.0

Length(nt)

        

1

0.79

0.86

0.96

0.78

0.86

0.89

0.78

1.00

2

0.78

0.79

0.97

0.83

0.88

0.93

0.87

1.00

3

0.89

0.88

0.98

0.88

0.91

0.87

0.79

1.00

4

1.15

1.07

0.95

1.04

1.00

0.94

1.02

1.00

5

1.19

1.20

1.06

1.31

1.12

1.13

1.27

1.00

6

1.37

1.32

1.07

1.50

1.17

1.23

1.35

1.00

7

1.52

1.46

1.07

1.56

1.41

1.36

1.87

1.00

8

1.58

1.63

1.18

1.77

1.66

1.66

2.13

1.00

9

1.92

2.04

1.27

2.16

1.92

1.86

2.04

1.01

10

2.50

2.55

1.54

2.61

2.40

2.31

3.32

1.00

11

3.25

3.21

1.84

3.03

3.12

2.91

3.94

1.04

12

4.36

4.29

2.20

3.49

4.05

3.52

3.96

1.09

13

5.88

5.54

2.89

4.20

5.34

4.81

6.66

1.09

14

8.04

7.48

3.58

5.95

7.53

5.49

7.40

1.14

15

11.58

10.16

4.83

7.73

10.36

8.89

7.30

1.05

16

16.72

14.53

6.88

11.61

14.94

9.41

14.66

1.13

17

25.35

21.48

9.93

16.54

23.05

14.02

17.71

0.89

18

42.06

33.01

14.38

25.45

28.84

18.81

22.87

2.31

19

64.06

48.22

18.28

33.12

47.22

35.56

30.68

0.84

20

103.6

72.85

27.99

52.46

80.36

41.02

52.55

1.68

21

174.7

125.1

42.56

78.76

102.2

57.42

65.01

8.39

22

282.3

199.9

71.06

98.38

175.9

98.42

94.94

 

23

469.8

335.7

110.7

217.2

251.0

54.67

69.90

 

24

866.6

575.0

150.4

270.7

384.1

131.2

159.6

 

25

1,541

945.3

231.4

436.7

662.4

306.1

159.5

 

26

2,579

1,815

350.4

545.9

1,086

1,049

398.3

 

27

4,622

2,774

502.4

1,092

1,680

874.1

318.3

 

28

7,680

4,946

1,005

1,383

2,622

1,049

635.9

 

29

13,213

8,650

1,322

1,747

4,971

2,796

3,811

 

30

24,464

14,667

1,798

4,658

6,664

5,591

2,538

 

31

38,470

24,969

3,808

6,696

11,143

2,795

2,535

 

32

63,495

36,998

5,077

16,304

16,167

11,177

-

 

33

121,761

66,771

8,461

11,646

23,594

22,348

-

 

34

176,291

145,557

10,153

18,633

38,448

-

-

 

35

349,595

204,479

30,460

32,608

108,348

178,697

-

 

36

507,958

380,048

81,226

37,266

209,697

89,326

80,562

 

37

1.10E+06

711,906

54,150

186,332

209,687

-

-

 

38

1.74E+06

1.50E+06

54,150

372,665

391,396

-

-

 

39

4.30E+06

2.12E+06

216,599

372,665

615,020

-

-

 

40

5.45E+06

4.85E+06

-

447,198

1.12E+06

-

-

 

41

1.11E+07

7.38E+06

433,193

1.79E+06

1.12E+06

2.85E+06

-

 

42

1.87E+07

1.42E+07

433,190

1.79E+06

2.24E+06

-

-

 

43

3.44E+07

2.15E+07

2.60E+06

2.39E+06

2.68E+06

-

-

 

44

4.59E+07

4.80E+07

1.73E+06

4.77E+06

1.07E+07

-

-

 

45

7.96E+07

8.12E+07

-

1.43E+07

1.79E+07

4.56E+07

-

 

46

1.29E+08

1.38E+08

6.93E+06

9.54E+06

4.29E+07

-

-

 

47

3.30E+08

2.75E+08

-

-

7.15E+07

1.82E+08

1.62E+08

 

48

6.61E+08

4.52E+08

-

3.82E+07

2.86E+07

-

-

 

49

1.13E+09

7.08E+08

-

2.29E+08

1.14E+08

-

-

 

50

2.25E+09

1.42E+09

1.11E+08

1.53E+08

2.29E+08

-

1.29E+09

 

51

3.13E+09

2.52E+09

-

6.11E+08

-

2.91E+09

-

 

52

7.44E+09

6.61E+09

-

-

4.58E+08

-

-

 

53

1.64E+10

1.07E+10

-

-

3.66E+09

-

-

 

54

3.13E+10

1.51E+10

-

4.88E+09

-

-

-

 

55

4.39E+10

2.01E+10

-

4.88E+09

3.66E+09

4.65E+10

-

 

56

1.07E+11

6.04E+10

-

1.95E+10

7.32E+09

   

57

1.38E+11

1.21E+11

-

5.86E+10

-

   

58

1.75E+11

1.81E+11

-

-

5.86E+10

   

59

4.51E+11

6.84E+11

-

-

5.86E+10

   

60

6.02E+11

8.85E+11

-

-

-

   

61

1.20E+12

1.77E+12

-

3.13E+11

2.34E+11

   

62

4.01E+12

3.22E+12

-

6.25E+11

4.68E+11

   

63

3.21E+12

7.72E+12

-

-

9.36E+11

   

64

1.12E+13

1.03E+13

-

-

1.87E+12

   

65

2.89E+13

1.80E+13

-

-

-

   

66

3.21E+13

3.08E+13

-

-

-

   

67

1.41E+14

1.34E+14

-

-

-

   

68

2.05E+14

2.26E+14

-

-

-

   

69

2.57E+14

2.88E+14

-

-

5.99E+13

   

70

6.16E+14

6.57E+14

4.65E+14

-

2.40E+14

   

71

1.23E+15

1.48E+15

 

6.40E+14

-

   

72

2.46E+15

3.61E+15

 

6.40E+14

-

   

73

4.93E+15

5.91E+15

 

-

-

   

74

4.93E+15

5.25E+15

 

-

1.92E+15

   

75

1.97E+16

7.88E+15

 

-

-

   

76

2.63E+16

2.63E+16

 

1.02E+16

-

   

77

6.57E+16

5.25E+16

 

2.05E+16

-

   

78

1.58E+17

6.30E+16

 

-

-

   

79

-

2.52E+17

 

-

-

   

80

4.21E+17

4.20E+17

 

-

2.45E+17

   

81

6.31E+17

8.39E+17

 

-

2.45E+17

   

82

2.52E+18

1.68E+18

 

-

-

   

83

8.41E+17

3.35E+18

 

-

-

   

84

6.73E+18

2.68E+18

 

-

1.96E+18

   

85

1.35E+19

5.36E+18

 

-

7.84E+18

   

86

3.36E+19

1.07E+19

 

1.05E+19

-

   

87

8.07E+19

5.36E+19

 

-

-

   

88

1.08E+20

1.29E+20

 

4.20E+19

-

   

89

2.69E+20

1.71E+20

 

-

-

   

90

4.31E+20

4.29E+20

 

-

-

   

91

1.29E+21

8.57E+20

 

-

-

   

92

1.72E+21

6.85E+20

 

0.00E+01

-

   

93

4.31E+21

2.06E+21

 

0.00E+01

-

   

94

6.89E+21

4.11E+21

 

-

-

   

95

6.89E+21

2.74E+21

 

0.00E+01

-

   

96

1.38E+22

5.48E+21

 

0.00E+01

3.21E+22

   

97

4.13E+22

5.47E+22

 

0.00E+01

6.41E+22

   

98

2.76E+22

1.09E+23

      

99

2.76E+23

-

      

100

2.20E+23

3.50E+23

      

101

0.00E+01

0.00E+01

      

Beyond This point ratios are not calculable at our precision.

From here, number of tracts, or lengths, are shown

102

1 (1Y)

-

 

Also:

Also:

   

103

4 (1Y+3R)

-

 

114 nt

108; 110 nt

   

104

2 (1Y+1R)

5 (3Y+2R)

 

117 nt

111; 121 nt

   

105

3 (1Y+2Y)

2 (2Y)

 

120 nt

124; 139 nt

   

106

5 (2Y+3R)

2 (1Y+1R)

 

134 nt

145; 169 nt

   

107

8 (6Y+2R)

3 (2Y+1R)

 

140 nt

174; 180 nt

   

108

1 (1R)

8 (4Y +4R)

 

161 nt

182; 189 nt

   

109

3 (2Y+1R)

1 (1R)

  

194 nt

   

110

2 (1Y+1R)

6 (4Y+2R)

      

Longer tracts and Summary

  

H. sap. 22 contig 23

H. sap. 21, contig 28

D. mel. IIR

C. eleg. I

A. thal. II

S. cer. IV

M. jan.

All found, up to (nt):

78

98

39

46

50

33

31

Next missing (nt)

114

102

45

52

54

37

37

100 to 200 nt (tracts):

113

142

-

6

13

-

-

Longer than 200 nt(tracts)

22

24

-

-

-

-

-

Longest (nt):

367

568

70

161

189

55

50

  1. A – (hyphen) means that no tract of that length is present