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Table 1 Quality metrics for 8 GeneChips using dChip (percentage of array outliers or single outliers) and MAS (percentage of probe sets with significant detection p-values)

From: A comparative analysis of data generated using two different target preparation methods for hybridization to high-density oligonucleotide microarrays

Experiment Array outliers (%) Single outliers (%) Detection P < 0.01 (%) Detection P < 0.05 (%)
1. IVT, NHTBE 0.02 0.04 21 31
2. IVT, NHTBE 0.06 0.16 24 34
3. IVT, NCI-H292 0.05 0.04 35 45
4. IVT, NCI-H292 0.23 0.09 36 47
5. dIVT, NHTBE 0.02 0.06 22 32
6. dIVT, NHTBE 0.40 0.20 13 20
7. dIVT, NCI-H292 0.03 0.19 25 34
8. dIVT, NCI-H292 0.04 0.10 26 36