Table 4 Detection of differentially expressed genes by IVT Protocol for different functional gene categories
Functional Category P(FC< 1/2 ∪ FC> 2) | Number of Genes Detected by IVT with >.99 | Number of Genes also Detected by dIVT with | ||
|---|---|---|---|---|
>.90 | >.95 | >.99 | ||
Apoptosis regulator | 1 | 1 | 0 | 0 |
Cell-cell signaling | 9 | 7 | 7 | 4 |
Cell cycle | 6 | 3 | 2 | 0 |
Cell death | 3 | 2 | 1 | 1 |
Cell motility | 5 | 4 | 4 | 0 |
Cell proliferation | 13 | 10 | 8 | 5 |
Defense and Immunity | 5 | 5 | 5 | 2 |
Extracelullar | 19 | 14 | 11 | 5 |
Homeostasis | 0 | 0 | 0 | 0 |
Nucleic acid binding | 16 | 7 | 6 | 3 |
Pathogenesis | 6 | 2 | 1 | 1 |
Signal transduction | 27 | 18 | 13 | 7 |
Stress response | 15 | 13 | 12 | 3 |
Transport | 11 | 8 | 5 | 2 |