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Table 1 Genomotyping results of N. gonorrhoeae strain FA1090 versus N. gonorrhoeae strain MS11.

From: Microarray genomotyping of key experimental strains of Neisseria gonorrhoeae reveals gene complement diversity and five new neisserial genes associated with Minimal Mobile Elements.

Gene probes hybridizing to FA1090 but not MS11

Genes known to be associated with divergence:

Lack of hybridization may be due to:

XNG0049 (pilC 1)

divergence in MS11 pilC sequence (Z50180)

XNG0210 (hypothetical)

maf-associated divergence

XNG0211 (hypothetical)

maf-associated divergence

XNG0212 (hypothetical)

maf-associated divergence

XNG0213 (hypothetical)

maf-associated divergence

XNG1280 (hypothetical)

maf-associated divergence

XNG0442 (hypothetical)

prophage region-associated divergence

XNG1509 (hypothetical)

prophage region-associated divergence

Genes associated with strain-specific regions:

Associated strain-specific region:

XNG0080 (hypothetical)

hypo-pglB MME

XNG0081 (hypothetical)

hypo-pglB MME

XNG0528 (hypothetical)

hypo-aspA MME

XNG0529 (hypothetical)

hypo-aspA MME

XNG0669 (hypothetical)

ribAB- hypo MME

XNG0670 (type I restriction enzyme M protein)

ribAB- hypo MME

XNG0671 (ribA-B)

ribAB- hypo MME

XNG0741 (hypothetical)

ung-hypo MME

XNG1618 (hypothetical)

nuoL-nuoM MME

Gene probes hybridizing to MS11 but not FA1090

Genes known to be associated with divergence

Hybridization to non-FA1090 probes may be due to:

NMA1797 (tspB)

divergence in MS11 tspB sequence

NMB1119 (hypothetical)

prophage region-associated divergence

NMB1120 (hypothetical)

prophage region-associated divergence

GCJDS60 (suppressor)

prophage region-associated divergence

GCJDS61 (regulator)

prophage region-associated divergence

Genes associated with strain-specific regions:

Associated strain-specific region:

59 Gonococcal Genetic Island genes

ung-hypo MME