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Table 2 Genomotyping results of N. gonorrhoeae strain FA1090 versus N. gonorrhoeae strain FA19.

From: Microarray genomotyping of key experimental strains of Neisseria gonorrhoeae reveals gene complement diversity and five new neisserial genes associated with Minimal Mobile Elements.

Gene probes hybridizing to FA1090 but not FA19
Genes known to be associated with divergence: Lack of hybridization may be due to:
XNG0049 (pilC 1) divergence in FA19 pilC sequence
XNG0211 (hypothetical) maf-associated divergence
XNG0212 (hypothetical) maf-associated divergence
XNG0213 (hypothetical) maf-associated divergence
XNG1848 (hypothetical) maf-associated divergence
XNG0458 (hypothetical) prophage region-associated divergence
XNG0459 (regulator) prophage region-associated divergence
XNG0460 (hypothetical) prophage region-associated divergence
XNG0461 (regulator) prophage region-associated divergence
XNG0462 (hypothetical) prophage region-associated divergence
XNG1006 (hypothetical) prophage region-associated divergence
XNG1509 (hypothetical) prophage region-associated divergence
Genes associated with strain-specific regions: Associated strain-specific region:
XNG0438 (hypothetical) pilin-AzlC MME
XNG0741 (hypothetical) ung-hypo MME
XNG0528 (hypothetical) hypo-aspA MME
XNG0529 (hypothetical) hypo-aspA MME
XNG1114 (hypothetical) uvrA-hypo MME
XNG1115 (methylase) uvrA-hypo MME
XNG1441 (hypothetical) nadC-xthA MME
Gene probes hybridizing to FA19 but not FA1090
Genes known to be associated with divergence Hybridization to non-FA1090 probes may be due to:
NMB1541 (lbpB) lbpB is known to be dead in FA1090 (AF072890)
NMA0036 (hypothetical) maf-associated divergence
NMB2109 (hypothetical) maf-associated divergence
NMB2110 (hypothetical) maf-associated divergence
NMA1360 (hypothetical) the presence of a sequenced gene fragment in FA19
NMB1119 (hypothetical) prophage region-associated divergence
NMB1120 (hypothetical) prophage region-associated divergence
GCJDS60 (suppressor) prophage region-associated divergence
GCJDS61 (regulator) prophage region-associated divergence
Genes associated with strain-specific regions: Associated strain-specific region:
NMA2121 (hypothetical) hypo-hypo MME
59 Gonococcal Genetic Island genes ung-hypo MME