Table 2 Microarray hybridisations used for the data analysis
Parameter | Figure | Microarrays used | Total Nr. of arrays | Normalisation group |
|---|---|---|---|---|
Comparability | 1a | Ta: 1,2 | 10 | α |
Tb: 3,4 | ||||
Tc: 5–7 | ||||
Td: 8–10 | ||||
Aa: 11,12 | 10 | |||
Ab: 13,14 | ||||
Ac: 15–17 | ||||
Ad: 18–20 | ||||
1b | A: 21–35 | 29 | β | |
B: 36–43 | ||||
C: 44–49 | ||||
Linearity | 2a | 5–7,50–53 (Cy5) | 14 | γ |
15–17,54–57 (Cy5) | ||||
- | 5–10 (Cy3) | 12 | δ | |
15–20 (Cy3) | ||||
Correlation | - | 44–49 | 6 | ε |
Reproducibility | 3 | 58–69 | 12 | ζ |
Correspondence | 4 | 50–57 | 8 | η |