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Table 1 Putative A. thaliana homologues of yeast vesicular trafficking components

From: A chloroplast-localized vesicular transport system: a bio-informatics approach

S. cerevisaea vesicular trafficking component (predicted size in kD)

A. thaliana homologue

BLAST-score (%identity / %positives)

E-value

Sec13

At3g01340

265 (47/63)

2e-071

 

At2g30050

258 (46/61)

3e-069

Sec31

At3g63460

236 (23/41)

2e-061

 

At1g18830

228 (23/43)

2e-059

Sec23

At4g14160

577 (39/58)

1e-165

 

At1g05520

577 (40/57)

1e-165

 

At3g23660

574 (39/58)

1e-164

 

At5g43670

545 (37/55)

1e-155

 

At2g21630

530 (38/56)

1e-150

Sec24

At3g07100

355 (32/52)

5e-098

Sar1

At1g56330

237 (63/75)

3e-063

 

At4g02080

232 (63/74)

1e-061

 

At3g62560

229 (62/75)

5e-061

 

At1g09180

220 (60/72)

4e-058

 

At1g02620

113 (55/70)

7e-026

Ret1

At1g62020

936 (41/59)

0.0

 

At2g21390

932 (42/59)

0.0

Sec26

At4g31490

650 (39/59)

0.0

 

At4g31480

650 (38/58)

0.0

Sec27

At1g79990

751 (47/66)

0.0

 

At1g52360

749 (46/67)

0.0

 

At3g15980

742 (46/66)

0.0

Sec21

At4g34450

488 (35/54)

e-138

Ret2

At5g05010

131 (41/71)

9e-031

Sec28

At2g34780

35 (24/41)

0.067

Ret3

At1g60970

95 (34/59)

3e-020

 

At3g09800

90 (33/54)

9e-019

 

At4g08520

89 (32/57)

2e-018

Arf1

At3g62290

296 (78/89)

4e-081

Clathrin

At3g08530

1419 (42/66)

0.0

heavy chain

At3g11130

1408 (42/65)

0.0

Clathrin light chain

At3g28770

41 (19/38)

7e-004