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Table 2 Phylogenetic relationships of non-arabidopsis plant FH2 proteins

From: Formin homology 2 domains occur in multiple contexts in angiosperms

Gene

Organism

Class

Closest relatives

Gene

Organism

Class

Closest relatives

BvFH1

Beta vulgaris

I

AtFH5 107/202 (52%)

NbFH6

N. benthamiana

Ic

NbFH1 47/48 (97%); AtFH5 41/48 (85%)

GaFH1

Gossypium arboreum

Ic

AtFH5 131/172 (76%)

NbFH7

N. benthamiana

Ia

NtFH2 154/181 (85%); AtFH1 60/188 (31%)

GaFH2

G. arboreum

Ia

MtFH1 116/171 (67%); AtFH1 105/169 (62%)

NtFH1

Nicotiana tabacum

Ia*

StFH4 177/218 (81%); AtFH1 216/293 (73%)

GhFH1

Gossypium hirsutum

I

SpFH1 89/109 (81%); AtFH1 144/197 (73%)

NtFH2

N. tabacum

Ia*

AtFH1 313/474 (66%)

GhFH2

G. hirsutum

Ib

LeFH1 165/227 (72%); AtFH6 158/221 (71%)

NtFH3

N. tabacum

Ic

AtFH5 109/156 (69%)

GmFH1

Glycine max

II*

MtFH5 113/133 (84%); AtFH13 182/278 (65%)

NtFH4

N. tabacum

II

GmFH1 105/165 (63%); AtFH13 97/195 (49%)

GmFH2

G. max

IIa

OsFH3 136/161 (84%); AtFH14 132/161 (81%)

NtFH5

N. tabacum

Ic

StFH5 58/87 (66%); AtFH5 36/50 (72%)

GmFH3

G. max

II

AtFH18 125/153 (81%)

NtFH6

N. tabacum

I

StFH5 71/150 (47%); AtFH3 56/153 (36%)

GmFH4

G. max

Ia

MtFH1 98/107 (91%); AtFH1 88/105 (83%)

OsFH1

Oryza sativa

I*

SpFH1 180/205 (87%); AtFH1 299/442 (67%)

GmFH5

G. max

I

StFH4 77/125 (61%); AtFH1 75/112 (66%)

OsFH2

O. sativa

Id*

AtFH11 227/409 (55%)

GmFH6

G. max

Ic

LeFH3 103/141 (73%); AtFH5 97/142 (68%)

OsFH3

O. sativa

IIa*

GmFH2 136/160 (85%); AtFH14 303/461 (65%)

HvFH1

Hordeum vulgare

II

OsFH5 190/217 (87%); AtFH18 146/217 (67%)

OsFH4

O. sativa

Ib*

OsFH8 373/495 (75%); AtFH6 292/486 (60%)

HvFH2

H. vulgare

I

OsFH13 144/168 (85%); AtFH6 114/164 (69%)

OsFH5

O. sativa

II*

HvFH1 190/217 (87%); AtFH20 259/445 (58%)

HvFH3

H. vulgare

I

OsFH13 177/237 (74%); AtFH6 121/227 (53%)

OsFH6

O. sativa

II*

AtFH18 265/382 (69%)

HvFH4

H. vulgare

I*

OsFH1 256/316 (81%); AtFH1 198/289 (68%)

OsFH7

O. sativa

IIb*

HvFH5 139/163 (85%); AtFH18 264/428 (61%)

HvFH5

H. vulgare

IIb

OsFH7 132/153 (86%); AtFH18 103/149 (69%)

OsFH8

O. sativa

Ib*

OsFH4 356/486 (73%); AtFH6 287/433 (66%)

HvFH6

H. vulgare

I

OsFH1 138/154 (89%); AtFH1 91/151 (60%)

OsFH9

O. sativa

Id*

AtFH11 220/404 (54%)

HvFH7

H. vulgare

Ic*

OsFH11 156/225 (69%); AtFH5 147/226 (65%)

OsFH10

O. sativa

Ic*

OsFH11 235/456 (51%); AtFH5 243/463 (52%)

HvFH8

H. vulgare

I

SpFH2 98/120 (81%); AtFH1 94/186 (50%)

OsFH11

O. sativa

Ic*

AtFH5 265/481 (55%)

HvFH9

H. vulgare

I

OsFH11 70/129 (54%); AtFH5 47/110 (42%)

OsFH12

O. sativa

II*

AtFH20 209/395 (52%)

HvFH10

H. vulgare

I

OsFH14 145/196 (73%); AtFH1 86/193 (44%)

OsFH13

O. sativa

I

HvFH2 144/168 (85%); AtFH6 224/443 (50%)

LeFH1

Lycopersicon esculentum

Ib*

StFH1 211/235 (89%); AtFH6 318/455 (69%)

OsFH14

O. sativa

I*

AtFH1 187/381 (49%)

LeFH2

L. esculentum

IIa*

StFH6 140/155 (90%); AtFH14 268/349 (76%)

OsFH15

O. sativa

I*

OsFH1 243/425 (57%); AtFH1 228/416 (54%)

LeFH3

L. esculentum

Ic*

StFH5 189/196 (96%); AtFH5 292/406 (71%)

OsFH16

O. sativa

I*

SbFH2 148/167 (88%); AtFH4 234/441 (53%)

LeFH4

L. esculentum

I

NtFH1 164/258 (63%); AtFH1 131/246 (53%)

PsFH1

Pisum sativum

Ic*

AtFH5 275/439 (62%)

LeFH5

L. esculentum

Ia

AtFH1 155/222 (69%)

SbFH1

Sorghum bicolor

II

HvFH1 105/126 (83%); AtFH18 93/147 (63%)

LeFH6

L. esculentum

II

OsFH5 95/144 (65%); AtFH20 99/178 (55%)

SbFH2

S. bicolor

Ie

OsFH16 137/167 (82%); AtFH7 107/167 (64%)

LeFH7

L. esculentum

I

NbFH1 66/98 (67%); AtFH5 62/108 (57%)

SpFH1

Sorghum propinquum

I

OsFH1 180/205 (87%); AtFH1 146/205 (71%)

LjFH1

Lotus japonicus

Id

AtFH11 111/140 (79%)

SpFH2

S. propinquum

I

OsFH15 172/204 (84%); AtFH1 128/205 (62%)

MtFH1

Medicago truncatula

Ia

GmFH4 98/106 (92%); AtFH1 215/299 (71%)

SpFH3

S. propinquum

I

OsFH1 93/111 (83%); AtFH1 72/91 (79%)

MtFH2

M. truncatula

Ia

AtFH1 143/182 (78%)

StFH1

Solanum tuberosum

Ib*

LeFH1 211/235 (89%); AtFH6 186/248 (75%)

MtFH3

M. truncatula

Ic

NbFH1 135/189 (71%); AtFH5 128/188 (68%)

StFH2

S. tuberosum

Ia

GhFH1 127/148 (85%); AtFH1 143/208 (68%)

MtFH4

M. truncatula

II

GmFH3 129/181 (71%); AtFH13 126/191 (65%)

StFH3

S. tuberosum

II

OsFH6 156/216 (72%); AtFH18 150/216 (69%)

MtFH5

M. truncatula

II

GmFH1 102/133 (76%); AtFH18 83/166 (50%)

StFH4

S. tuberosum

Ia

NtFH1 186/217 (85%); AtFH1 149/211 (70%)

MtFH6

M. truncatula

II

AtFH20 76/124 (61%)

StFH5

S. tuberosum

Ic

LeFH3 189/196 (96%); AtFH5 152/229 (66%)

NbFH1

Nicotiana benthamiana

Ic

LeFH3 225/241 (93%); AtFH5 189/240 (78%)

StFH6

S. tuberosum

IIa

LeFH2 153/155 (98%); AtFH14 123/154 (79%)

NbFH2

N. benthamiana

Ib

LeFH1 138/150 (92%); AtFH6 100/162 (61%)

TaFH1

Triticum aestivum

I

HvFH4 178/196 (90%); AtFH1 145/192 (75%)

NbFH3

N. benthamiana

Ic

StFH5 100/124 (80%); AtFH5 91/143 (63%)

VvFH1

Vitis vinifera

I

OsFH1 114/185 (61%); AtFH1 104/192 (54%)

NbFH4

N. benthamiana

I

AtFH6 115/278 (41%)

ZmFH1

Zea mays

I

OsFH1 119/154 (77%); AtFH1 81/154 (52%)

NbFH5

N. benthamiana

I

NtFH2 101/146 (69%); AtFH1 77/140 (55%)

    
  1. As "closest relatives", sequences with best match altogether and best Arabidopsis match are shown (defined as identity at least 80 % across at least 100 amino acids, if available, or best BLAST score). Numbers denote fraction of identical amino acids throughout the length of sequence analysed (putative orthologues with more than 80 % identity in bold). Sequences marked by an asterisk are included in Fig. 1. The partial sequences MtFH4, MtFH5 and MtFH6 might correspond to different parts of the same gene. For database references and protein sequence predictions see Additional files 2 to 4.