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Table 4 Number of genes mapped to retinal disease loci

From: The Retinome – Defining a reference transcriptome of the adult mammalian retina/retinal pigment epithelium

Disease Chr. Flanking DNA marker   Size of locus (Mb) No. of SGPs (n = 43,109) No. of retinome transcripts a) (n = 13,307) No. of "retinome-enriched" transcripts (n = 5,051)
AA 11 D11S1323 D11S902 11.21 213 65 13
AIED X DXS7 DXS72 37.33 479 129 49
AXPC1 1 D1S2692 D1S414 3.00 43 7 3
BBS3 3 D3S1603 D3S1271 2.28 28 10 1
BBS5 2 D2S142 D2S326 16.81 353 50 24
BCD 4 D4S3051 D4S1652 2.06 17 2 1
CACD 17 D17S1810 CHLC.GAT7B03 3.17 118 76 36
COD2 X DXS292 DXS1113 6.1 37 5 3
COD4 X DXS10042 DXS8060 32.44 436 117 45
CORD1 18 marker position not available - - - -
CORD4 17 marker position not available - - - -
CORD8 1 D1S442 D1S2681 19.86 485 222 74
CORD9 8 D8S1820 D8S532 12.79 179 43 16
CRV 3 D3S3564 D3S1578 11.2 271 157 72
CYMD 7 D7S435 D7S526 1.56 25 13 7
EVR3 11 GATA34E08 D11S4102 14.00 192 35 13
LCA3 14 D14S606 D14S610 5.95 178 36 15
LCA5 6 D6S1551 D6S1694 36.08 541 263 93
LCA9 1 D1S1612 D1S228 5.52 130 51 22
MCDR1 6 D6S249 D6S1671 2.44 45 2 0
MCDR2 4 D4S3023 D4S3022 21.00 253 57 20
MCDR3 5 D5S1981 D5S2031 19.94 184 36 14
MCDR4 14 D14S261 - 10.00 b) 58 11 4
MRST 15 D15S211 D15S152 4.70 106 24 11
OPA2 X DXS993 DXS991 14.31 245 69 24
OPA4 18 D18S34 D18S548 2.55 23 3 1
PRD X MAOB DXS426 3.92 67 18 6
RCD1 6 marker position not available - - - -
RNANC 10 D10S1225 D10S1418 5.76 58 9 2
ROA1 8 D8S1702 D8S1794 11.87 150 30 13
RP6 X DXS28 DXS164 4.92 60 4 2
RP17 17 D17S1607 D17S948 7.18 130 44 17
RP22 16 D16S287 D16S420 6.33 92 40 14
RP23 X DXS1223 DXS7161 10.51 140 30 15
RP24 X DXS8094 DXS8043 7.75 74 6 3
RP28 2 D1S1337 D2S286 45.78 674 194 68
RP29 4 D4S3035 D4S2417 3.66 28 5 2
STGD4 4 D4S1582 D4S2397 16.56 187 33 10
USH1A 14 D14S99E D14S292 6.98 134 44 18
USH1E 21 D21S1905 D21S1913 11.48 77 19 10
USH2B 3 D3S1578 D3S3658 12.80 287 161 74
USH2C 5 D5S428 D5S433 18.54 269 34 13
VRNI 11 INT2 D11S873 22.41 311 89 37
WFS2 4 D4S2366 D4S3023 2.18 26 10 5
WGN1 5 D5S626 D5S2103 7.11 84 9 4
  1. a) See additional File 14; b) Linkage to a single DNA marker reported. An arbitrary locus size of 10.0 Mb was assigned.