Table 1 CTLD-encoding genes identified in the Fugu rubripes genome.^a

AGGRECAN

AGGRECAN

ANUFRUG00000000095

ANUFR2G00000000089

AGGRECAN-F1

Fugu aggrecan paralogue

ANUFRUG00000000081

ANUFR2G00000000077

BREVICAN

BREVICAN

SINFRUG00000078610

SINFRUG00000151617

BREVICAN-F1

Fugu brevican paralogue

SINFRUG00000074933

SINFRUG00000128229,

SINFRUG00000128230,

SINFRUG00000128231

NEUROCAN

NEUROCAN

SINFRUG00000054833

SINFRUG00000150572,

SINFRUG00000150573,

SINFRUG00000150574,

SINFRUG00000150576

NEUROCAN-F1

Fugu Neurocan paralogue

ANUFRUG00000000142

ANUFR2G00000000154

VERSICAN

VERSICAN

ANUFRUG00000000144

ANUFR2G00000000164

VERSICAN-F1

Fugu versican paralogue (fragment containing EGF, CTLD and CCP domains)

ANUFRUG00000000061

ANUFR2G00000000059

VERSICAN-F2

Fugu versican paralogue (fragment containing link and Ig domains)

ANUFRUG00000000043

ANUFR2G00000000041

II Dendritic cell receptors, mono-ctld macrophage receptors, ASGR

DC-SIGN-F1

Fugu DC-SIGN paralogue

ANUFRUG00000000029

ANUFR2G00000000027

DC-SIGN-F2

Fugu DC-SIGN paralogue

ANUFRUG00000000067

ANUFR2G00000000063

DC-SIGN-F3

Fugu DC-SIGN paralogue

ANUFRUG00000000069

ANUFR2G00000000065

DC-SIGN-F4

Fugu DC-SIGN paralogue

ANUFRUG00000000071

ANUFR2G00000000067

DC-SIGN-F5

Fugu DC-SIGN paralogue

ANUFRUG00000000073

ANUFR2G00000000069

DC-SIGN-F6

Fugu DC-SIGN paralogue

ANUFRUG00000000109

ANUFR2G00000000105

DC-SIGN-F7

Fugu DC-SIGN paralogue

ANUFRUG00000000085

ANUFR2G00000000123

DC-SIGN-F8

Fugu DC-SIGN paralogue

ANUFRUG00000000087

ANUFR2G00000000081

DC-SIGNR

DCSIGN receptor

ANUFRUG00000000027

ANUFR2G00000000025

HML2

Similar to human macrophage lectin

SINFRUG00000060881

SINFRUG00000120587

SRCL

Scavenger receptor with C-type lectin

SINFRUG00000071148

SINFRUG00000134389

SRCL-F1

Putative Fugu paralogue of SRCL

SINFRUG00000064389

SINFRUG00000152316

XLCMCL

eXtra Large Coiled coil region containing Membrane C-type Lectin

ANUFRUG00000000053

ANUFR2G00000000051

III Collectins

COLEC10

COLEC10

SINFRUG00000077039

SINFRUG00000125405

MGC3279

Uncharacterized collectin family member

SINFRUG00000064196

SINFRUG00000147955

IV Selectins

SELECTIN-E

E-Selectin

ANUFRUG00000000001

ANUFR2G00000000001

SELECTIN-L

L-SELECTIN

ANUFRUG00000000003

ANUFR2G00000000003

SELECTIN-P

P-SELECTIN

ANUFRUG00000000005

ANUFR2G00000000005

VI Multi-CTLD molecules. Macrophage Mannose Receptor (MMR) family

DEC205

DEC205

ANUFRUG00000000011

ANUFR2G00000000011

Endo180

Endo180

SINFRUG00000058766

SINFRUG00000152106

MManR

Macrophage mannose receptor

SINFRUG00000071196

SINFRUG00000126868,

SINFRUG00000134363

MManR-F1

Fugu mannose receptor paralogue (fragment)

SINFRUG00000064600

SINFRUG00000152797

MManR-F2

Fugu macrophage mannose receptor paralogue.

ANUFRUG00000000039

ANUFR2G00000000035

ANUFR2G00000000037

MManR-F3

Fugu paralogue of MMR-family gene

SINFRUG00000066378

SINFRUG00000152288

MManR-F4

Fugu paralogue of MMR-family gene (fragment)

SINFRUG00000078047

SINFRUG00000152861

MManR-F5

Fugu MMR-family member (fragment)

ANUFRUG00000000091

ANUFR2G00000000085

PLA2R

Phosopholipase A2 receptor

ANUFRUG00000000009

ANUFR2G00000000009

VIII MT-75, layilin

LAYILIN

Layilin

ANUFRUG00000000089

ANUFR2G00000000083

LAYILIN-F1

Fugu layilin paralogue

ANUFRUG00000000075

ANUFR2G00000000071

MT-75

MT-75

SINFRUG00000084745

SINFRUG00000145404

IX Tetranectin family

CLECSF1

CLECSF1

SINFRUG00000050048

SINFRUG00000136890

SCGF

SCGF

ANUFRUG00000000125

ANUFR2G00000000121

TETRANECTIN

Tetranectin

SINFRUG00000084961

SINFRUG00000144710

TETRANECTIN-F1

Fugu tetranectin paralogue

SINFRUG00000083037

SINFRUG00000149544

X PKD

PKD1

Polycystic kidney disease protein 1

SINFRUG00000033997

PKD1L2

PKD-1 homologue 2

ANUFRUG00000000121

ANUFR2G00000000117

XI Attractin family

ATTRACTIN

Attractin

SINFRUG00000071911

SINFRUG00000136030

ATTRACTIN-F1

Fugu paralogue of Attractin

SINFRUG00000060472

SINFRUG00000147061

KIAA0534

KIAA0534

SINFRUG00000056251

SINFRUG00000121439

XII Eosinophil major basic protein family

EMBPL

Putative Fugu EMBP-like protein

ANUFRUG00000000023

ANUFR2G00000000021

XIII DGCR family

DGCR2

DGCR2

SINFRUG00000082125

SINFRUG00000155593

XIV Thrombomodulin family

C1qRP

C1qRP

ANUFRUG00000000049

ANUFR2G00000000047

C1qRP-F1

Putative Fugu C1qRP paralogue (fragment)

ANUFRUG00000000013

disappeared

CETM

Protein containing CTLD, EGF and transmembrane domains

ANUFRUG00000000057

ANUFR2G00000000055

ENDOSIALIN

ENDOSIALIN

ANUFRUG00000000117

ANUFR2G00000000113

THROMBOMOD

Thrombomodulin

SINFRUG00000077807

SINFRUG00000153798

XV Bimlec

BIMLEC

Novel C-type lectin from BCG cell wall induced monocyte

ANUFRUG00000000007

ANUFR2G00000000007

XVI SEEC

SEEC

Novel SCP-EGF-EFG-CTLD containing protein.

ANUFRUG00000000041

ANUFR2G00000000039

XVII CBCP

CBCP

Calx-Beta and CTLD containing protein

ANUFRUG00000000047

ANUFR2G00000000045

AFP Antifreeze protein

AFPL-F1

Antifreeze protein-like

ANUFRUG00000000045

ANUFR2G00000000043

AFPL-F2

Antifreeze protein-like

ANUFRUG00000000139

disappeared

F1 Fugu dual-CTLD molecules

FDC-F1

Putative Fugu dual-CTLD protein 1

ANUFRUG00000000025

ANUFR2G00000000023

FDC-F2

Putative Fugu dual-CTLD protein 2

ANUFRUG00000000037

ANUFR2G00000000033

FDC-F3

Putative Fugu dual-CTLD protein 3

ANUFRUG00000000099

ANUFR2G00000000093

FDC-F4

Putative Fugu dual-CTLD protein 4

ANUFRUG00000000103

ANUFR2G00000000097,

ANUFR2G00000000099

FDC-F5

Putative Fugu dual-CTLD protein 5

ANUFRUG00000000107

ANUFR2G00000000103

FDC-F6

Putative Fugu dual-CTLD protein 6

ANUFRUG00000000123

ANUFR2G00000000119

FDC-F7

Putative Fugu dual-CTLD protein 7

ANUFRUG00000000101

ANUFR2G00000000095

FTCP

Putative Fugu triple-CTLD protein

ANUFRUG00000000015

ANUFR2G00000000013

L Link domain

BRAL1

Brain link protein-1

SINFRUG00000078615

SINFRUG00000151615

CD44

CD44

ANUFRUG00000000113

ANUFR2G00000000109

CRTL1

Cartilage linking protein 1

SINFRUG00000078961

SINFRUG00000137046

CRTL1-F1

Putative fugu cartilage linking protein paralogue

ANUFRUG00000000059

ANUFR2G00000000057

CRTL1-F2

Putative fugu cartilage linking protein paralogue

SINFRUG00000074643

SINFRUG00000142167,

SINFRUG00000142169,

SINFRUG00000142171

HAPLN3

Hyaluronan and proteoglycan link protein 3

SINFRUG00000052853

SINFRUG00000155413

HAPLN3-F1

Putative Fugu paralogue of HAPLN3

SINFRUG00000079552

SINFRUG00000129575

Lyve-1

Lymphatic vessel endothelial HA receptor-1

ANUFRUG00000000077

ANUFR2G00000000073

STABILIN-1

Stabilin-1

ANUFRUG00000000079

ANUFR2G00000000075

STABILIN-2

Stabilin-2

SINFRUG00000074867

SINFRUG00000146665

TSG-6

TSG-6

SINFRUG00000075173

SINFRUG00000148136

NLSLH

NLSLH

Novel L-SeLectin Homologue

ANUFRUG00000000055

ANUFR2G00000000053

NLSLH-F1

Fugu CTLD containing gene fragment, NLSLH paralogue

ANUFRUG00000000097

ANUFR2G00000000091

U Unclassified

AGGRECOL

Putative Fugu CTLD-containing protein equally similar to aggrecan and placenta collectin.

ANUFRUG00000000083

ANUFR2G00000000079

ANZG001

Putative Fugu CTLD-containing protein (fragment)

ANUFRUG00000000019

ANUFR2G00000000017

ANZG002

Putative Fugu CTLD-containing protein (fragment)

ANUFRUG00000000021

ANUFR2G00000000019

ANZG004

Putative Fugu protein with CTLD and FTP domains

ANUFRUG00000000093

ANUFR2G00000000087

ANZG005

Putative Fugu CTLD-containing protein (fragment)

ANUFRUG00000000065

disappeared

ANZG006

Putative Fugu CTLD-containing protein (fragment)

ANUFRUG00000000111

ANUFR2G00000000107

ANZG007

Putative Fugu CTLD-containing protein (fragment)

ANUFRUG00000000063

ANUFR2G00000000061

ANZG008

Putative Fugu CTLD-containing protein (fragment)

ANUFRUG00000000017

ANUFR2G00000000015

ANZG010

Putative Fugu CTLD-containing protein

ANUFRUG00000000051

ANUFR2G00000000049

ANZG011

Putative Fugu CTLD-containing protein

ANUFRUG00000000115

ANUFR2G00000000111

CFN3

Protein with CTLD and FN3 domains.

ANUFRUG00000000105

ANUFR2G00000000101

DEC205-FUSE

Large Fugu protein which looks like a DEC205 fused to another CTLD-containing gene

ANUFRUG00000000119

ANUFR2G00000000115

FG75645

Fugu CTLD-containing protein fragment

SINFRUG00000075645

SINFRUG00000139863

PTP-GMC1

Protein-tyrosine phosphatase expressed by glomerular mesangial cells

ANUFRUG00000000130

ANUFR2G00000000137