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Table 5 Functional annotation of contigs

From: From biomedicine to natural history research: EST resources for ambystomatid salamanders

 

A. mex

A. t. tig

Molecular Function (0016209)

  

   antioxidant (0016209)

25

29

   binding (0005488)

3117

2578

   chaparone (0003754)

100

85

   enzyme regulation (003023)

193

223

   motor (0003774)

73

75

   signal transduction (0004871)

344

375

   structural protein (0005198)

501

411

   transcriptional reg. (0030528)

296

221

   translational reg. (0045182)

94

59

   bone remodeling (0046849)

8

8

   circulation (0008015)

23

78

   immune response (000695)

182

263

   respiratory ex. (0009605)

254

288

   respiratory in. (0009719)

72

58

   stress (0006950)

263

320

Biological Process (0008150)

  

Cellular (0009987)

  

   activation (0001775)

4

6

   aging and death (0008219)

158

148

   communication (0007154)

701

696

   differentiation (0030154)

31

20

   extracellular mat. (0043062)

4

4

   growth and main. (0008151)

1731

1445

   migration (0016477)

8

14

   motility (0006928)

163

154

Developmental (0007275)

  

   aging (0007568)

32

21

   embryonic (0009790)

6

1

   growth (0040007)

2

2

   morphogenesis (0009653)

350

272

   pigment (0048066)

13

26

   post embryonic (0009791)

8

13

   reproduction (0000003)

42

27

Physiological (0007582)

  

   coagulation (0050817)

22

73

   death and aging (0016265)

159

148

   homeostasis (0042592)

22

27

   metabolism (0008152)

3059

2513

   secretion (0046903)

9

16

   sex differentiation (0007548)

3

2

  1. Numbers in parentheses reference GO numbers [23].