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Table 2 Examples of modules of shared cis-elements in K-cluster, set 15 genes. All elements of a module are within a 200 bp window and are present in both the human and mouse orthologs. Modules are located within 3-kb upstream of the transcription start site.

From: Microarray and comparative genomics-based identification of genes and gene regulatory regions of the mouse immune system

 

Genes

Modules of shared cis -elements

Arid1a

Abcg1

Sgpl1

Man2b1

Ctsl

Zfp162

Tcf12

AP2F EGRF MAZF SP1F ZBPF

+

+

+

-

-

-

-

AP2F EGRF SP1F ZBPF

+

+

+

-

-

-

-

AP2F MAZF SP1F ZBPF

+

+

+

-

-

-

-

AP2F HESF MAZF SP1F

+

+

+

-

-

-

-

MAZF SP1F ZBPF

+

+

+

-

-

-

-

AP2F MAZF SP1F

+

+

+

-

-

-

-

AP2F SP1F ZBPF

+

+

-

-

-

-

-

EGRF MAZF ZBPF

+

+

+

-

-

-

-

ETSF SP1F ZBPF

+

+

+

-

-

-

-

AP2F EGRF ETSF SP1F ZBPF

+

+

+

-

-

-

-

AP2F MAZF MZF1 SP1F ZBPF

+

+

-

-

-

-

-

AP2F MAZF MZF1 SP1F

+

+

-

-

-

-

-

AP2F MZF1 SP1F ZBPF

+

+

-

-

-

-

-

ETSF MAZF SP1F

+

-

+

-

-

-

-

EGRF ETSF ZBPF

+

-

+

-

-

-

-