Table 6 The twenty most conserved Tortula gene clusters between Physcomitrella and Arabidopsis
Tortula Cluster | Physcomitrella Identity | Bit Score | e-value |
|---|---|---|---|
Contig_2145 | PPCContig_497 Q9AY32 (Q9AY32) RRNA intron-encoded homing endonuclease | 813 | 0.0E+00 |
Contig_1352 | PPCContig_406 Q9AVH2 (Q9AVH2) Putative senescence-associated protein (Fra | 630 | 0.0E+00 |
Contig_3546 | PPCContig_1008 O04892 (O04892) Cytochrome P450 like_TBP (EC 1.14.14.1) | 448 | 1.8E-126 |
Contig_602 | PPCContig_359 polyubiquitin UBQ10/SEN3 | 413 | 1.2E-115 |
Contig_480 | PPCContig_12 Q9SPA1 (Q9SPA1) Elongation factor-1 alpha 3 | 306 | 1.4E-83 |
Contig_966 | PPCContig_1903 EF1A_VICFA (O24534) Elongation factor 1-alpha (EF-1-alpha) | 284 | 5.8E-77 |
Contig_1126 | PPCContig_2103 Q41067 (Q41067) Polyubiquitin | 250 | 5.9E-67 |
Contig_1901 | PPCContig_1954 Q8H932 (Q8H932) Alpha tubulin | 241 | 7.4E-64 |
Contig_1538 | PPCContig_4431 heat shock protein hsc70-1 (hsp70-1) (hsc70.1) | 233 | 1.6E-61 |
Contig_1444 | PPCContig_49 ADP-ribosylation factor 1 (ARF1), putative | 208 | 4.6E-54 |
Contig_919 | PPCContig_1049 Q9SXW8 (Q9SXW8) Chlorophyll a/b-binding protein | 205 | 3.0E-53 |
Contig_1381 | PPCContig_2023 Q8S173 (Q8S173) Putative 60S ribosomal protein L37a | 197 | 5.3E-51 |
Contig_5058 | PPCContig_951 Q9SWW8 (Q9SWW8) Actin (Fragment) | 195 | 3.3E-50 |
Contig_1676 | PPCContig_2347 calmodulin | 193 | 8.7E-50 |
Contig_1366 | PPCContig_846 Q84NX8 (Q84NX8) Putative ribosomal protein L19 | 174 | 8.0E-44 |
Contig_2369 | PPCContig_2689 O04664 (O04664) Small RAS-like GTP-binding protein (AT5G551 173 | 9.9E-44 | |
Contig_1934 | PPCContig_4083 Q9SJB9 (Q9SJB9) Putative translation initiation factor eIF- | 171 | 3.3E-43 |
Contig_3793 | PPCContig_3975 Q9LFN6 (Q9LFN6) DEAD box RNA helicase RH15 | 169 | 1.9E-42 |
Contig_1721 | PPCContig_2679 H33_ARATH (P59169) Histone H3.3 | 165 | 2.1E-41 |
Contig_3462 | PPCContig_970 Q43821 (Q43821) Ubiquitin conjugating enzyme (EC 6.3.2.19) | 160 | 1.2E-39 |
Tortula Cluster | Arabidopsis Identity | Bit Score | e-value |
Contig_3469 | ATCG00340 (PSAB) photosystem I P700 apoprotein A2 | 1120 | 0.0E+00 |
Contig_882 | AT1G07930. elongation factor 1-alpha (EF-1-alpha) | 666 | 0.0E+00 |
Contig_602 | AT4G05320.4 polyubiquitin UBQ10/SEN3 | 617 | 1.0E-175 |
Contig_2170 | ATCG00490 (RBCL) riblose 1 | 435 | 5.0E-121 |
Contig_1984 | AT5G02960.1 40S ribosomal protein S23 (RPS23B) | 431 | 5.2E-120 |
Contig_1538 | AT5G02500.1 heat shock protein hsc70-1 (hsp70-1) (hsc70.1) | 366 | 3.2E-100 |
Contig_1124 | AT4G05050.1 polyubiquitin UBQ11 | 341 | 5.8E-93 |
Contig_1444 | AT1G23490.1 ADP-ribosylation factor 1 (ARF1), putative | 307 | 1.2E-82 |
Contig_1901 | AT1G50010.1 tubulin alpha-2/alpha-4 chain (TUA2) | 303 | 3.7E-81 |
Contig_52 | AT3G12580.1 heat shock protein hsp70 | 291 | 1.3E-77 |
Contig_1060 | AT4G38510.1 probable H+-transporting ATPase | 285 | 4.1E-76 |
Contig_1125 | AT4G02890.2 polyubiquitin (UBQ14) | 274 | 8.3E-73 |
Contig_3069 | AT4G40040.1 histone H3.2 | 270 | 1.4E-71 |
Contig_1935 | AT5G08290.1 YLS8, Dim1 homolog | 264 | 1.1E-69 |
Contig_2698 | AT5G45775.2 60S ribosomal protein L11 (RPL11D) | 260 | 1.2E-68 |
Contig_5058 | AT5G09810.1 ACTIN 2/7 (sp|P53492) | 258 | 6.8E-68 |
Contig_1676 | AT3G43810.1 calmodulin | 252 | 2.8E-66 |
Contig_3867 | AT3G05530.1 26S proteasome AAA-ATPase subunit RPT5a | 232 | 3.4E-60 |
Contig_347 | AT3G11940.2 40S ribosomal protein S5 (RPS5B) | 230 | 2.2E-59 |
Contig_1052 | AT2G29550.1 tubulin beta-7 chain (TUB7) | 218 | 1.3E-55 |