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Table 1 Cross-fluorescence of tested dyes. Fluorescence of dyes at scanner settings of all dyes expressed as a percentage of fluorescence at its own settings (the latter was set to 100%).

From: Application of four dyes in gene expression analyses by microarrays

dye

Alexa 488

Alexa 594

Cy3

Cy5

settings

    

Alexa 488

100.0

0.0

1.1

0.0

Alexa 594

0.9

100.0

1.3

13.0

Cy3

0.0

2.2

100.0

0.0

Cy5

0.1

0.1

0.2

100.0