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Table 5a Performance of a dye combination in revealing modulated genes in B[a]P (3 μM) treated HepG2 cells using a cDNA array.

From: Application of four dyes in gene expression analyses by microarrays

 

Cy5-Cy3

Cy3-A594

A488-Cy5

A594-A488

Cy5-Cy3

50*

   

Cy3-A594

40

50

  

A488-Cy5

25

35

50

 

A594-A488

40

40

25

40

  1. * In bold the intersection of two gene lists indicating the modulated genes for a dye combination as percentage of all modulated genes (20 genes) found by analysis of all dye combinations combined. In italics the intersection of three gene lists indicating the modulated genes for two dye combinations as percentage of all modulated genes found for all dye combinations combined. The first dye was used for B[a]P treatment, the second for the control.
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BMC Genomics

ISSN: 1471-2164

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