Skip to main content
Figure 2 | BMC Genomics

Figure 2

From: Laterally transferred elements and high pressure adaptation in Photobacterium profundum strains

Figure 2

Genomic organization of the three P. profundum strains compared with expression level and differentially expressed genes obtained from microarray experiments. Form the outside inward circles represent: 1, 2) predicted protein-coding ORFs on the plus and minus strands of SS9 genome (colours were assigned according to the colour code of the COG functional classes); 3) transposon-related proteins (black bars) and genes showing similarity with phage proteins (green bars); differentially expressed genes in 4) 0.1 MPa vs. 28 MPa microarray experiment (green and red bars represent genes up-regulated respectively at 0.1 MPa and 28 MPa); 5) 45 MPa vs. 28 MPa (green and red bars represent genes up-regulated respectively at 28 MPa and 45 MPa); 6) 4°C vs. 16°C (green and red bars represent genes up-regulated respectively at 16°C and 4°C); 7) genomic regions absent (red bars) or duplicate (blue bars) in 3 TCK strain (compared to SS9 strain) and 8) in DSJ4 strain (compared to SS9); 9) GC content variation; 10) 10 kbp windows genomic signature compared to total genomic signature; 11) absolute expression level at 28 MPa obtained from microarray experiments.

Back to article page