Skip to main content

Table 1 Comparison of the Affymetrix MPAM and SNiPer algorithms.

From: SNiPer: Improved SNP genotype calling for Affymetrix 10K GeneChip microarray data

ALGORITHM %NOCALLS CONCORDANCEVS. MPAM INHERITANCE ACCURACY
MPAM 5.22% ± 0.03% ------ 99.94%
SNiPer 0.97% ± 1.27% 98.61% ± 0.21% 99.80%