Table 2 BAC end sequences of the positive clones mapped on the C57BL/6J genome
Gene | Probe position | BAC clone/primer | BES position | Strand | Insert size (bp) | |
|---|---|---|---|---|---|---|
mapped | PFGE | |||||
Mash | chr7:130,672,998 | 327-5I/T7 | chr7:130,587,753 | + | 132,317 | 145,000 |
327-5I/SP6 | chr7:130,720,069 | - | ||||
Ads | chr12:35,152,780 | 262-11G/SP6 | multiple hits | n.d. | 105,000 | |
262-11G/T7 | chr12:35,192,443 | - | ||||
266-2E/SP6 | chr12:35,090,782 | + | 109,399 | 115,000 | ||
266-2E/T7 | chr12:35,200,180 | - | ||||
Igf2r | chr17:12,150,509 | 279-5I/SP6 | chr17:12,057,702 | + | 125,000 | 120,000 |
279-5I/T7 | chr17:12,182,701 | - | ||||
282-5D/T7 | chr17:12,028,446 | + | 144,525 | 145,000 | ||
282-5D/SP6 | chr17:12,172,970 | - | ||||
245-11P/SP6 | chr17:12,000,500 | + | 186,822 | 195,000 | ||
245-11P/T7 | chr17:12,187,321 | - | ||||
Tbp | chr17:14,324,440 | 297-2I/T7 | chr17:14,291,556 | + | 147,925 | 145,000 |
297-2I/SP6 | chr17:14,439,480 | - | ||||
Usp26 | chrX:44,101,113 | 293-21P/T7 | chrX:44,086,068 | + | 184,994 | 190,000 |
293-21P/SP6 | chrX:44,271,061 | - | ||||
Xist | chrX:94,885,652 | 269-9H/SP6 | chrX:94,817,775 | + | 150,314 | 160,000 |
269-9H/T7 | chrX:94,968,088 | - | ||||
255-3L/T7 | chrX:94,756,622 | + | 134,724 | 145,000 | ||
255-3L/SP6 | chrX:94,891,345 | - | ||||
271-12L/SP6 | chrX:94,854,496 | + | 131,966 | 140,000 | ||
271-12L/T7 | chrX:94,986,461 | - | ||||
Tex13 | chrX:130,816,302 | 257-22B/SP6 | chrX:130,761,904 | + | 124,211 | 120,000 |
257-22B/T7 | chrX:130,886,114 | - | ||||
322-4J/SP6 | chrX:130,761,839 | + | 117,691 | 110,000 | ||
322-4J/T7 | chrX:130,879,529 | - | ||||