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Table 2 Pfam protein domain families restricted to plant-associated bacteria and eukaryotes.

From: Protein domains and architectural innovation in plant-associated Proteobacteria

Pfam domain family Species distribution (not exhaustive)
CBM_14 PF01607 Chitin binding Peritrophin-A domain Ralstonia solanacearum; Metazoa; Fungi; Viruses
CD225 PF04505 Interferon- induced transmembrane protein Xanthomonas campestris (pv campestris); Metazoa;
DUF726 PF05277 Protein of unknown function (DUF726) Pseudomonas syringae (pv tomato); Metazoa; Plants;
DUF763 PF05559 Protein of unknown function (DUF763) Mesorhizobium loti; Sinorhizobium meliloti; Xanthomonas axonopodis (pv. citri); Xanthomonas campestris (pv. campestris); Archaea;
GDA1_CD39 PF01150 GDA1/CD39 (nucleoside phosphatase) family Pseudomonas syringae (pv. Tomato); Plants; Fungi; Metazoa;
Het-C PF07217 Heterokaryon incompatibility protein Het-C Pseudomonas syringae (pv. tomato); Fungi;
PAX PF00292 'Paired box' domain Rhizobium etli; Mesorhizobium loti; Metazoa;
PPR PF01535 PPR repeat Ralstonia solanacearum; Plants; Metazoa; Fungi;
Rhamnogal_lyase PF06045 Rhamnogalacturonate lyase family Erwinia carotovora subsp. atroseptica SCRI1043; Erwinia chrysanthemi; Plants;
Ribosomal_60s PF00428 60s Acidic ribosomal protein Ralstonia solanacearum (Pseudomonas solanacearum); Plants; Metazoa; Archaea;
RolB_RolC PF02027 RolB/RolC glucosidase family Agrobacterium rhizogenes; Agrobacterium tumefaciens (strain Ach5), and Agrobacterium tumefaciens (strain 15955); Agrobacterium tumefaciens (strain Ach5), and Agrobacterium tumefaciens; Agrobacterium tumefaciens (strain Ach5); Agrobacterium tumefaciens (strain C58 / ATCC 33970); Agrobacterium tumefaciens; Agrobacterium vitis (Rhizobium vitis); Plants;
SBP56 PF05694 56 kDa selenium binding protein (SBP56) Bradyrhizobium japonicum; ; Plants; Metazoa; Archaea;
ST7 PF04184 ST7 protein Rhizobium loti (Mesorhizobium loti); Metazoa;
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