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Table 1 Statistics on shotgun sequencing of the wild rat-derived genomic library

From: Efficient single nucleotide polymorphism discovery in laboratory rat strains using wild rat-derived SNP candidates

picked colonies 1632
readable sequence reads/sequenced bases 2975/814,440
uniquely mapped (BLAT) reads/bases 2545/768,683
ambiguous positions 4902
strong candidates after manual inspection 868 (746 SNPs + 122 indels)
successfully read/amplicons designed* 416/451 (~1.65 candidate SNP/amplicon) (92.2%)
amplified bases per strain or wild individual 118,971
  1. * Amplicons are designed for the 746 SNP candidates.