|
ACI
|
AO
|
AUG
|
BDE
|
BDII
|
BDIX
|
BDV
|
BH
|
BN
|
BN2
|
BS
|
BUF
|
COP
|
DA
|
DA2
|
E3
|
F344
|
LEW
|
LE
|
LOU
|
LUDW
|
MWF
|
MNS
|
NAR
|
OM
|
PAR
|
PVG
|
R33
|
RP
|
SD
|
SD2
|
SHR
|
SR
|
SS
|
WAG
|
WC
|
WF
|
WIST
|
WKY
|
wild3
|
wild2
|
wild1
|
---|
ACI
|
x
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
AO
|
131
|
x
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
AUG
|
111
|
167
|
x
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
BDE
|
145
|
178
|
158
|
x
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
BDII
|
130
|
166
|
143
|
148
|
x
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
BDIX
|
129
|
196
|
191
|
159
|
115
|
x
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
BDV
|
109
|
131
|
145
|
137
|
78
|
142
|
x
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
BH
|
145
|
189
|
192
|
212
|
156
|
177
|
167
|
x
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
BN
|
225
|
263
|
279
|
266
|
206
|
258
|
244
|
274
|
x
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
BN2
|
227
|
270
|
285
|
268
|
222
|
271
|
251
|
274
|
4
|
x
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
BS
|
159
|
167
|
163
|
178
|
166
|
185
|
143
|
180
|
246
|
251
|
x
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
BUF
|
148
|
158
|
181
|
171
|
168
|
190
|
151
|
166
|
250
|
263
|
158
|
x
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
COP
|
84
|
194
|
187
|
166
|
155
|
147
|
155
|
191
|
262
|
275
|
203
|
192
|
x
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
DA
|
62
|
107
|
116
|
134
|
115
|
130
|
117
|
130
|
210
|
216
|
150
|
126
|
116
|
x
| | | | | | | | | | | | | | | | | | | | | | | | | | | | |
DA2
|
76
|
141
|
144
|
157
|
149
|
167
|
127
|
176
|
261
|
269
|
193
|
167
|
151
|
2
|
x
| | | | | | | | | | | | | | | | | | | | | | | | | | | |
E3
|
136
|
189
|
170
|
86
|
154
|
180
|
144
|
204
|
244
|
253
|
172
|
182
|
171
|
148
|
180
|
x
| | | | | | | | | | | | | | | | | | | | | | | | | | |
F344
|
132
|
165
|
178
|
178
|
152
|
150
|
138
|
144
|
170
|
176
|
141
|
156
|
166
|
121
|
165
|
168
|
x
| | | | | | | | | | | | | | | | | | | | | | | | | |
LEW
|
156
|
178
|
213
|
197
|
160
|
163
|
141
|
169
|
213
|
222
|
166
|
160
|
191
|
133
|
181
|
186
|
16
|
x
| | | | | | | | | | | | | | | | | | | | | | | | |
LE
|
131
|
144
|
136
|
155
|
148
|
152
|
122
|
142
|
221
|
224
|
157
|
127
|
147
|
110
|
140
|
167
|
142
|
149
|
x
| | | | | | | | | | | | | | | | | | | | | | | |
LOU
|
145
|
146
|
165
|
191
|
153
|
203
|
120
|
178
|
242
|
250
|
138
|
171
|
212
|
111
|
142
|
192
|
126
|
150
|
149
|
x
| | | | | | | | | | | | | | | | | | | | | | |
LUDW
|
153
|
175
|
186
|
198
|
161
|
169
|
153
|
195
|
252
|
263
|
183
|
177
|
189
|
123
|
163
|
215
|
115
|
125
|
133
|
161
|
x
| | | | | | | | | | | | | | | | | | | | | |
MWF
|
148
|
147
|
172
|
166
|
136
|
166
|
111
|
167
|
209
|
222
|
135
|
148
|
185
|
133
|
164
|
158
|
115
|
134
|
148
|
136
|
163
|
x
| | | | | | | | | | | | | | | | | | | | |
MNS
|
151
|
167
|
178
|
173
|
158
|
186
|
122
|
169
|
239
|
250
|
155
|
194
|
210
|
128
|
176
|
166
|
123
|
132
|
156
|
141
|
159
|
137
|
x
| | | | | | | | | | | | | | | | | | | |
NAR
|
147
|
169
|
184
|
212
|
168
|
177
|
145
|
177
|
233
|
249
|
146
|
155
|
197
|
134
|
193
|
188
|
137
|
166
|
122
|
170
|
153
|
164
|
151
|
x
| | | | | | | | | | | | | | | | | | |
OM
|
127
|
161
|
153
|
170
|
120
|
158
|
143
|
150
|
216
|
222
|
154
|
138
|
176
|
125
|
147
|
183
|
125
|
156
|
127
|
156
|
139
|
143
|
144
|
147
|
x
| | | | | | | | | | | | | | | | | |
PAR
|
140
|
182
|
168
|
166
|
149
|
158
|
133
|
175
|
225
|
227
|
155
|
138
|
167
|
136
|
159
|
169
|
128
|
136
|
127
|
151
|
159
|
133
|
160
|
150
|
162
|
x
| | | | | | | | | | | | | | | | |
PVG
|
95
|
164
|
152
|
153
|
153
|
181
|
129
|
184
|
252
|
263
|
170
|
151
|
164
|
110
|
150
|
148
|
142
|
175
|
145
|
143
|
196
|
146
|
161
|
172
|
160
|
147
|
x
| | | | | | | | | | | | | | | |
R33
|
155
|
198
|
183
|
213
|
169
|
198
|
186
|
177
|
261
|
257
|
173
|
210
|
204
|
142
|
184
|
223
|
183
|
209
|
164
|
185
|
196
|
191
|
187
|
182
|
159
|
173
|
189
|
x
| | | | | | | | | | | | | | |
RP
|
146
|
159
|
171
|
171
|
132
|
164
|
109
|
186
|
216
|
230
|
113
|
161
|
176
|
138
|
175
|
153
|
119
|
141
|
134
|
141
|
166
|
108
|
157
|
136
|
147
|
132
|
139
|
166
|
x
| | | | | | | | | | | | | |
SD
|
121
|
154
|
156
|
177
|
153
|
160
|
129
|
118
|
233
|
247
|
149
|
134
|
174
|
100
|
148
|
184
|
131
|
138
|
135
|
125
|
145
|
144
|
141
|
149
|
103
|
133
|
130
|
147
|
138
|
x
| | | | | | | | | | | | |
SD2
|
95
|
116
|
134
|
150
|
117
|
130
|
122
|
85
|
219
|
220
|
117
|
96
|
145
|
104
|
115
|
168
|
109
|
115
|
92
|
99
|
110
|
118
|
121
|
107
|
90
|
121
|
109
|
126
|
109
|
16
|
x
| | | | | | | | | | | |
SHR
|
159
|
212
|
166
|
186
|
179
|
175
|
168
|
204
|
264
|
275
|
188
|
178
|
180
|
135
|
189
|
205
|
156
|
176
|
173
|
202
|
188
|
180
|
200
|
184
|
182
|
177
|
192
|
207
|
187
|
185
|
139
|
x
| | | | | | | | | | |
SR
|
129
|
171
|
172
|
170
|
160
|
161
|
147
|
138
|
235
|
244
|
163
|
131
|
170
|
120
|
172
|
174
|
146
|
169
|
156
|
157
|
175
|
150
|
160
|
164
|
136
|
117
|
134
|
166
|
160
|
60
|
64
|
184
|
x
| | | | | | | | | |
SS
|
114
|
145
|
167
|
183
|
142
|
150
|
139
|
111
|
249
|
253
|
149
|
152
|
175
|
117
|
161
|
186
|
136
|
161
|
121
|
134
|
156
|
146
|
153
|
128
|
130
|
143
|
145
|
145
|
144
|
69
|
46
|
191
|
83
|
x
| | | | | | | | |
WAG
|
120
|
105
|
156
|
147
|
143
|
158
|
115
|
160
|
197
|
200
|
96
|
125
|
164
|
94
|
136
|
151
|
110
|
132
|
127
|
96
|
145
|
120
|
121
|
129
|
140
|
126
|
128
|
154
|
108
|
118
|
84
|
181
|
119
|
110
|
x
| | | | | | | |
WC
|
140
|
164
|
158
|
155
|
129
|
180
|
92
|
188
|
214
|
232
|
151
|
177
|
177
|
125
|
158
|
157
|
131
|
160
|
156
|
145
|
171
|
87
|
157
|
179
|
152
|
158
|
138
|
213
|
126
|
153
|
122
|
195
|
170
|
157
|
126
|
x
| | | | | | |
WF
|
155
|
183
|
195
|
211
|
162
|
164
|
152
|
183
|
266
|
274
|
176
|
173
|
193
|
129
|
175
|
224
|
120
|
123
|
133
|
156
|
50
|
180
|
158
|
148
|
141
|
155
|
196
|
189
|
157
|
141
|
97
|
201
|
179
|
135
|
149
|
186
|
x
| | | | | |
WIST
|
101
|
116
|
116
|
113
|
98
|
101
|
112
|
93
|
160
|
162
|
107
|
91
|
119
|
83
|
114
|
133
|
82
|
86
|
82
|
110
|
95
|
89
|
94
|
85
|
105
|
101
|
96
|
115
|
100
|
83
|
51
|
112
|
71
|
67
|
76
|
114
|
91
|
x
| | | | |
WKY
|
169
|
208
|
198
|
213
|
164
|
188
|
168
|
208
|
264
|
276
|
208
|
181
|
205
|
128
|
170
|
228
|
180
|
210
|
165
|
229
|
206
|
200
|
220
|
195
|
189
|
197
|
208
|
205
|
194
|
196
|
148
|
115
|
196
|
189
|
183
|
216
|
203
|
101
|
x
| | | |
wild3
|
137
|
181
|
153
|
177
|
162
|
164
|
134
|
149
|
175
|
194
|
156
|
173
|
153
|
111
|
172
|
169
|
162
|
182
|
156
|
184
|
173
|
171
|
160
|
149
|
134
|
140
|
161
|
154
|
165
|
161
|
120
|
152
|
160
|
152
|
140
|
158
|
178
|
108
|
163
|
x
| | |
wild2
|
197
|
233
|
207
|
223
|
182
|
213
|
194
|
187
|
256
|
268
|
203
|
221
|
211
|
181
|
227
|
218
|
204
|
243
|
180
|
234
|
220
|
213
|
210
|
203
|
177
|
198
|
219
|
202
|
214
|
210
|
163
|
190
|
208
|
205
|
208
|
213
|
210
|
141
|
210
|
52
|
x
| |
wild1
|
334
|
414
|
368
|
406
|
329
|
405
|
339
|
372
|
520
|
551
|
369
|
400
|
395
|
315
|
392
|
397
|
386
|
446
|
338
|
415
|
410
|
413
|
391
|
403
|
331
|
352
|
377
|
371
|
387
|
373
|
321
|
334
|
375
|
388
|
372
|
404
|
410
|
280
|
357
|
134
|
157
|
x
|
- The matrix is built from genotyping data of 960 polymorphisms in 36 strains and three wild individuals. Two inbred strains are represented by two substrains (BN and DA) and outbred SD is represented by two individuals from different stocks. Sets of polymorphisms, including a graphical representation, can be retrieved from [24].