Figure 7
Predicted locations of transmembrane helices and intervening loops in the putative protein encoded by ORF5 (traE) of pBJS-O. The sequential amino acid positions in the primary sequence of the polypeptide are on the X-axis, while the probability score of each residue for being in a transmembrane helix is on the Y-axis in red. The blue and pink curves denote the probability of each amino acid in the sequence to be cytosolic or extracellular, respectively. In the schematic representation of the protein domains at the top, blue lines show the cytosolic portions, purple ones denote the extracellular portions and the thick horizontal bars denote the predicted transmembrane portions of the polypeptide, respectively.