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Table 6 The most abundantly represented transcripts in the A. ceylanicum cDNA libraries

From: Investigating hookworm genomes by comparative analysis of two Ancylostoma species

     non-redundant GenBank   
A. ceylanicum cluster id ESTs Per cluster ESTs from Library   Accession   C. elegans gene
   iL3 Ad Best identity descriptor SW / TRa E-value Wormpep97b
AE00908.cl 323 320 3 C. elegans stress associated endoplasmic reticulum protein NP_510604 9e – 37 F59F4.2b
AE00787.cl 205 205 0 C. elegans hsp-12.6 alpha-B-crystallin Q20165 7e – 39 F38E11.2b
AE01104.cl 155 155 0 C. elegans microsomal signal peptidase 25 kDa subunit Q9XWW1 8e – 80 Y37D8A.10b
AE00463.cl 119 118 1 C. elegans dlc-1 dynein light chain (10.3 kD) NP_498422 9e – 56 T26A5.9b
AE00121.cl 110 0 110 C. elegans vit-3 Vitellogenin 3 precursor NP_508613 7e – 121 F59D8.1b
AE00890.cl 84 84 0 C. elegans spp-4 SaPosin-like Protein family NP_509237 5e – 16 T08A9.8b
AE00065.cl 84 84 0 C. elegans putative endoplasmic reticulum protein NP_508656 1e – 35 F47B7.1b
AE00360.cl 74 74 0 novel - - -
AE00048.cl 72 72 0 C. elegans rpl-29 60S ribosomal protein L29 NP_502671 6e – 25 B0513.3b
AE00003.cl 70 3 67 novel - - -
AE01410.cl 63 60 3 Ostertagia ostertagi putative ES protein F7 CAD20464 3e – 86 F02A9.2
AE00056.cl 62 56 6 C. elegans hypothetical protein AAK77617 5e – 39 M01H9.3ab
AE00464.cl 61 61 0 novel - - -
AE00227.cl 59 0 59 Zea mays extensin-like protein S49915 2e – 31 ZK84.1
AE00746.cl 54 0 54 C. elegans protein contains chitin binding peritrophin-A domain AAA19083 3e – 54 B0280.5b
AE00750.cl 50 36 14 C. elegans far-7 fatty Acid/Retinol binding protein NP_493708 7e – 45 K01A2.2ab
AE00072.cl 47 0 47 Beta vulgaris chitinase S51939 6e – 12 C34D4.11
AE00591.cl 45 45 0 C. elegans hypothetical protein AAF99918 7e – 26 F29B9.11b
AE01221.cl 44 44 0 Volvox carteri hydroxyproline-rich glycoprotein DZ-HRGP CAB62280 1e – 29 Y59A8B.19
AE01407.cl 41 41 0 C. elegans elt-3 GATA-binding transcription factor like CAA93510 5e – 18 K02B9.4b
AE00033.cl 41 0 41 Nippostrongylus brasiliensis hsp-20 Nbhsp20 CAA50655 8e – 56 T27E4.3
AE01361.cl 40 39 1 C. elegans ICD-1 inhibitor of cell death AAA68776 1e – 75 C56C10.8b
AE00322.cl 39 37 2 C. elegans hypothetical protein CAB54416 7e – 28 Y38E10A.24b
AE00536.cl 36 34 2 Homo sapiens unnamed protein product BAB71316 4e – 134 F25B5.4a
AE00503.cl 35 13 22 C. elegans eft-3 elongation factor 1-alpha NP_498520 3e – 283 F31E3.5b
  1. a SW/TR is Swiss-prot and TrEMBL Proteinknowledgebase http://us.expasy.org/sprot/.
  2. b C. elegans homolog has higher probability match than the best GenBank descriptor.