Figure 2

PathwayVoyager main window. Screenshot of the graphical user interface. (A) and (B) indicate listboxes showing the organisms that can be individually selected and pathways represented in KEGG at the time of analysis. Button for exiting the software, redo the analysis, and accessing the setup are located beneath both boxes. Section (C) resembles the step-by-step design to start the analysis, retrieve the selected organisms and pathways, and subsequently obtain the respective protein sequences. In manual mode, the KEGG analysis and pathway retrieval can be activated by the user. Existing KEGG analyses can be reviewed by accessing the lowest button. On-the-fly options, for re-using previous organism-pathway selections and respective BlastP results, are located in the top region of section (C).